Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 8 curated entries in PaperBLAST's database that match '3.5.3.7' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
| PfGW456L13_4435: Agmatinase (EC 3.5.3.11) is similar to: | PaperBLAST |
gbuA / Q88EE2: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas putida | 92% id, 99% cov |
GBUA_PSEAE / Q9I3S3: Guanidinobutyrase; EC 3.5.3.7 from Pseudomonas aeruginosa | 90% id, 100% cov |
gbuA / A0A0A1DPD5: 5-guanidino-2-oxopentanoate ureohydrolase (EC 3.5.3.7) from Nocardioides simplex | 46% id, 98% cov |
| PfGW456L13_2989: Agmatinase (EC 3.5.3.11) is similar to: | PaperBLAST |
gbuA / A0A0A1DPD5: 5-guanidino-2-oxopentanoate ureohydrolase (EC 3.5.3.7) from Nocardioides simplex | 43% id, 95% cov |
GBUA_PSEAE / Q9I3S3: Guanidinobutyrase; EC 3.5.3.7 from Pseudomonas aeruginosa | 44% id, 93% cov |
gbuA / Q88EE2: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas putida | 44% id, 92% cov |
| PfGW456L13_2689: Agmatinase (EC 3.5.3.11) is similar to: | PaperBLAST |
gbuA / Q88EE2: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas putida | 34% id, 93% cov |
gbuA / A0A0A1DPD5: 5-guanidino-2-oxopentanoate ureohydrolase (EC 3.5.3.7) from Nocardioides simplex | 33% id, 94% cov |
GBUA_PSEAE / Q9I3S3: Guanidinobutyrase; EC 3.5.3.7 from Pseudomonas aeruginosa | 34% id, 90% cov |
| PfGW456L13_2993: Agmatinase (EC 3.5.3.11) is similar to: | PaperBLAST |
gbuA / A0A0A1DPD5: 5-guanidino-2-oxopentanoate ureohydrolase (EC 3.5.3.7) from Nocardioides simplex | 59% id, 16% cov |
gbh / Q8KZT5: guanidinobutyrase subunit (EC 3.5.3.7) from Arthrobacter sp. | 60% id, 14% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2988741-2989760 (frame +3) on scaffold1/0|quiver|pilon is similar to: | PaperBLAST |
gbh / Q8KZT5: guanidinobutyrase subunit (EC 3.5.3.7) from Arthrobacter sp. | 36% id, 88% cov |
Lawrence Berkeley National Laboratory