Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 17 curated entries in PaperBLAST's database that match '3.7.1.3' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_4288: Kynureninase (EC 3.7.1.3)
is similar to:
PaperBLAST

PfGW456L13_4288: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

100% id,
100% cov

KYNU_PSEFL / P83788: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Pseudomonas fluorescens
kyn / P83788: kynureninase subunit (EC 3.7.1.3) from Pseudomonas fluorescens
P83788: kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

93% id,
100% cov

AO353_05935: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

90% id,
100% cov

More...

PfGW456L13_2571: 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
is similar to:
PaperBLAST

BPHYT_RS16030: Kynureninase (EC 3.7.1.3) from Burkholderia phytofirmans

25% id,
60% cov

PfGW456L13_4288: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

30% id,
30% cov

PS417_23650: Kynureninase (EC 3.7.1.3) from Pseudomonas simiae

28% id,
32% cov

More...

PfGW456L13_3934: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
is similar to:
PaperBLAST

RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis

34% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory