Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 10 curated entries in PaperBLAST's database that match '4.1.1.45' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_3397: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45)
is similar to:
PaperBLAST

nbaD / A4IT47: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) from Geobacillus thermodenitrificans

30% id,
100% cov

ACMSD_HUMAN / Q8TDX5: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Homo sapiens
ACMSD / Q8TDX5: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Homo sapiens
Q8TDX5: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Homo sapiens

27% id,
99% cov

ACMSD_MOUSE / Q8R519: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Mus musculus
Q8R519: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Mus musculus

28% id,
87% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory