Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 45 curated entries in PaperBLAST's database that match '4.4.1.13' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_3934: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
is similar to:
PaperBLAST

METC_COXBU / Q83A83: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Coxiella burnetii

39% id,
97% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

40% id,
93% cov

B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

40% id,
85% cov

More...

PfGW456L13_3090: putative aminotransferase
is similar to:
PaperBLAST

CBL_BACSU / Q08432: Cystathionine beta-lyase PatB; CBL; Beta-cystathionase PatB; Cysteine lyase PatB; Cysteine-S-conjugate beta-lyase PatB; EC 4.4.1.13 from Bacillus subtilis

37% id,
100% cov

CBL_THET8 / Q5SHW0: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Thermus thermophilus

36% id,
99% cov

MALY_ECOLI / P23256: Protein MalY; EC 4.4.1.13 from Escherichia coli
MalY / b1622: negative regulator of MalT activity/cystathionine β-lyase (EC 4.4.1.13; EC 4.4.1.1; EC 4.4.1.28; EC 5.1.1.1) from Escherichia coli
malY / P23256: negative regulator of MalT activity/cystathionine β-lyase (EC 4.4.1.13; EC 4.4.1.1; EC 5.1.1.10) from Escherichia coli

34% id,
100% cov

More...

PfGW456L13_4856: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

34% id,
96% cov

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

33% id,
96% cov

CCBL2 / Q6YP21: Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7; EC 4.4.1.13) from Homo sapiens
Q6YP21: kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Homo sapiens

34% id,
89% cov

More...

PfGW456L13_4472: Cysteine synthase (EC 2.5.1.47)
is similar to:
PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

42% id,
66% cov

PfGW456L13_3363: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

CBL_THET8 / Q5SHW0: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Thermus thermophilus

30% id,
91% cov

PfGW456L13_2032: Cysteine synthase B (EC 2.5.1.47)
is similar to:
PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

41% id,
65% cov

PfGW456L13_2943: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

34% id,
75% cov

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

33% id,
75% cov

MALY_ECOLI / P23256: Protein MalY; EC 4.4.1.13 from Escherichia coli
MalY / b1622: negative regulator of MalT activity/cystathionine β-lyase (EC 4.4.1.13; EC 4.4.1.1; EC 4.4.1.28; EC 5.1.1.1) from Escherichia coli
malY / P23256: negative regulator of MalT activity/cystathionine β-lyase (EC 4.4.1.13; EC 4.4.1.1; EC 5.1.1.10) from Escherichia coli

23% id,
97% cov

More...

PfGW456L13_3206: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

31% id,
80% cov

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

33% id,
75% cov

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus
Q71RI9: glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus

30% id,
76% cov

More...

PfGW456L13_1529: Valine--pyruvate aminotransferase (EC 2.6.1.66)
is similar to:
PaperBLAST

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

26% id,
94% cov

CBL_CORGT / Q93QC6: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Corynebacterium glutamicum

25% id,
94% cov

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus
Q71RI9: glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus

26% id,
86% cov

More...

PfGW456L13_2252: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

SUR1 / Q9SIV0: alkyl-thiohydroximate C-S lyase (EC 4.4.1.13) from Arabidopsis thaliana

29% id,
80% cov

Q84UD0: cysteine-S-conjugate beta-lyase (EC 4.4.1.13); L-cystine beta-lyase (EC 4.4.1.35) from Brassica oleracea

27% id,
74% cov

CBL_THET8 / Q5SHW0: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Thermus thermophilus

28% id,
58% cov

More...

PfGW456L13_1928: Uncharacterized PLP-dependent aminotransferase YfdZ
is similar to:
PaperBLAST

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

23% id,
99% cov

CCBL2 / Q6YP21: Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7; EC 4.4.1.13) from Homo sapiens
Q6YP21: kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Homo sapiens

24% id,
91% cov

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus
Q71RI9: glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus

24% id,
90% cov

More...

PfGW456L13_4930: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

CBL_BACSU / Q08432: Cystathionine beta-lyase PatB; CBL; Beta-cystathionase PatB; Cysteine lyase PatB; Cysteine-S-conjugate beta-lyase PatB; EC 4.4.1.13 from Bacillus subtilis

23% id,
75% cov

PfGW456L13_3185: Threonine dehydratase (EC 4.3.1.19)
is similar to:
PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

34% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory