Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 15 curated entries in PaperBLAST's database that match '5.1.3.4' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
| PfGW456L13_4163: Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109) is similar to: | PaperBLAST |
ARAD_BACSU / P94525: L-ribulose-5-phosphate 4-epimerase; Phosphoribulose isomerase; EC 5.1.3.4 from Bacillus subtilis | 27% id, 83% cov |
ULAF_ECOLI / P39306: L-ribulose-5-phosphate 4-epimerase UlaF; L-ascorbate utilization protein F; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli | 25% id, 82% cov |
SGBE_ECOLI / P37680: L-ribulose-5-phosphate 4-epimerase SgbE; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli | 32% id, 45% cov |
| PfGW456L13_4552: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases is similar to: | PaperBLAST |
ULAF_ECOLI / P39306: L-ribulose-5-phosphate 4-epimerase UlaF; L-ascorbate utilization protein F; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli | 25% id, 75% cov |
Shewana3_2065: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Shewanella sp. | 20% id, 46% cov |
| PfGW456L13_2326: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases is similar to: | PaperBLAST |
ULAF_ECOLI / P39306: L-ribulose-5-phosphate 4-epimerase UlaF; L-ascorbate utilization protein F; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli | 32% id, 38% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory