Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 14 curated entries in PaperBLAST's database that match '5.3.1.7' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_1893: N-acylglucosamine 2-epimerase (EC 5.1.3.8)
is similar to:
PaperBLAST

Pf1N1B4_597: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens

90% id,
99% cov

AO356_05200: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens

84% id,
99% cov

AO353_03400: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens

82% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory