Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 3 curated entries in PaperBLAST's database that match '5.5.1.2' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
| PfGW456L13_4586: 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) is similar to: | PaperBLAST |
RR42_RS32055: 3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2) from Cupriavidus basilensis | 53% id, 97% cov |
pcaB2 / Q2HNY9: 3-carboxymuconate lactonizing enzyme type 2 (EC 5.5.1.2) from Hydrogenophaga intermedia | 40% id, 92% cov |
Q2HNZ1: 3-Carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) from Agrobacterium tumefaciens | 36% id, 95% cov |
| PfGW456L13_854: Argininosuccinate lyase (EC 4.3.2.1) is similar to: | PaperBLAST |
Q2HNZ1: 3-Carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) from Agrobacterium tumefaciens | 24% id, 75% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory