Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 3 curated entries in PaperBLAST's database that match '5.5.1.27' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
| PfGW456L13_2128: Galactonate dehydratase (EC 4.2.1.6) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 35% id, 90% cov |
| PfGW456L13_3930: Gluconate dehydratase (EC 4.2.1.39) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 31% id, 96% cov |
| PfGW456L13_3824: Muconate cycloisomerase (EC 5.5.1.1) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 26% id, 98% cov |
| PfGW456L13_2480: Glucarate dehydratase (EC 4.2.1.40) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 25% id, 90% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory