Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 14 curated entries in PaperBLAST's database that match '6.3.1.11'.

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
is similar to:
PaperBLAST

PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

100% id,
100% cov

AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

100% id,
100% cov

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

99% id,
100% cov

More...

PfGW456L13_926: glutamine synthetase family protein
is similar to:
PaperBLAST

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

73% id,
100% cov

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

56% id,
100% cov

Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

35% id,
100% cov

More...

PfGW456L13_3221: glutamine synthetase family protein
is similar to:
PaperBLAST

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

72% id,
100% cov

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

55% id,
99% cov

Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

34% id,
100% cov

More...

PfGW456L13_4498: glutamine synthetase family protein
is similar to:
PaperBLAST

Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

45% id,
100% cov

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

45% id,
99% cov

AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

45% id,
97% cov

More...

PfGW456L13_1993: glutamine synthetase family protein
is similar to:
PaperBLAST

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

42% id,
96% cov

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

41% id,
96% cov

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

32% id,
98% cov

More...

PfGW456L13_3804: glutamine synthetase family protein
is similar to:
PaperBLAST

BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis

40% id,
94% cov

PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli
YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli
puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli

38% id,
95% cov

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

35% id,
99% cov

More...

PfGW456L13_2714: glutamine synthetase family protein
is similar to:
PaperBLAST

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

30% id,
96% cov

Psest_4288: Glutamate--putrescine ligase (EC 6.3.1.11) from Pseudomonas stutzeri

30% id,
94% cov

PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae

30% id,
94% cov

More...

PfGW456L13_342: Glutamine synthetase type I (EC 6.3.1.2)
is similar to:
PaperBLAST

PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae

28% id,
98% cov

AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

28% id,
98% cov

PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

28% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory