Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)
Found 3 curated entries in PaperBLAST's database that match '3-isopropylmalate dehydratase%LeuC' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query
PfGW456L13_3948: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) is similar to: | PaperBLAST |
LeuC / b0072: 3-isopropylmalate dehydratase subunit LeuC (EC 4.2.1.33) from Escherichia coli | 64% id, 100% cov |
DVU2982: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 33% id, 99% cov |
PfGW456L13_3592: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) is similar to: | PaperBLAST |
LeuC / b0072: 3-isopropylmalate dehydratase subunit LeuC (EC 4.2.1.33) from Escherichia coli | 53% id, 99% cov |
DVU2982: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 35% id, 100% cov |
PfGW456L13_4116: 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) is similar to: | PaperBLAST |
LeuC / b0072: 3-isopropylmalate dehydratase subunit LeuC (EC 4.2.1.33) from Escherichia coli | 27% id, 77% cov |
DVU2982: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 27% id, 72% cov |
PfGW456L13_4052: Aconitate hydratase (EC 4.2.1.3) is similar to: | PaperBLAST |
DVU2982: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 30% id, 45% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory