Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens GW456-L13 (pseudo13_GW456_L13)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens GW456-L13, or try another query

PfGW456L13_3254: Trehalose synthase (EC 5.4.99.16)
is similar to:
PaperBLAST

AAM42629.1: sucrose hydrolase (SuxB;XCC3359) (EC 3.2.1.-)

31% id,
51% cov

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

30% id,
50% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

31% id,
48% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory