Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 24 curated entries in PaperBLAST's database that match '1.1.1.17' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4846: Multiple polyol-specific dehydrogenase (EC 1.1.1.-)
is similar to:
PaperBLAST

C7FDI4: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Beauveria bassiana

24% id,
68% cov

MTLD_PHANO / Q0U6E8: Mannitol-1-phosphate 5-dehydrogenase; M1PDH; MPD; MPDH; EC 1.1.1.17 from Phaeosphaeria nodorum

24% id,
67% cov

MTLD_ALTAL / Q6UQ76: Mannitol-1-phosphate 5-dehydrogenase; M1PDH; MPD; MPDH; EC 1.1.1.17 from Alternaria alternata

23% id,
67% cov

More...

Pf1N1B4_3808: hydrolase, haloacid dehalogenase-like family
is similar to:
PaperBLAST

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

27% id,
32% cov

Q6FBP5: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baylyi

27% id,
27% cov

Pf1N1B4_4255: Putative phosphatase YfbT
is similar to:
PaperBLAST

Q6FBP5: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baylyi

26% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory