Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 19 curated entries in PaperBLAST's database that match '1.1.1.18' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4280: Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
is similar to:
PaperBLAST

AO353_21365: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas fluorescens

97% id,
100% cov

AO356_23190: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas fluorescens

96% id,
100% cov

PS417_11875: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas simiae

93% id,
100% cov

More...

Pf1N1B4_4388: Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
is similar to:
PaperBLAST

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

39% id,
99% cov

HSERO_RS12095: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Herbaspirillum seropedicae

35% id,
100% cov

MI2D_RHIME / O68965: Inositol 2-dehydrogenase; Myo-inositol 2-dehydrogenase; MI-dehydrogenase; EC 1.1.1.18 from Rhizobium meliloti
SM_b20899: Inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium meliloti
O68965: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium meliloti

33% id,
99% cov

More...

Pf1N1B4_4526: Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

34% id,
97% cov

HSERO_RS12095: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Herbaspirillum seropedicae

23% id,
99% cov

Q9EZV8: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium fredii

27% id,
79% cov

More...

Pf1N1B4_4282: Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
is similar to:
PaperBLAST

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

25% id,
99% cov

Pf1N1B4_4096: Nucleoside-diphosphate-sugar epimerases
is similar to:
PaperBLAST

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

24% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory