Curated BLAST
Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 12 curated entries in PaperBLAST's database that match '1.1.1.286'.
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
Pf1N1B4_4052: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) is similar to: | PaperBLAST |
Q4J6C9: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Sulfolobus acidocaldarius | 51% id, 94% cov |
IDH-II / P93032: NAD+-dependent isocitrate dehydrogenase regulatory subunit (EC 1.1.1.286) from Arabidopsis thaliana | 32% id, 88% cov |
IDH-V / Q945K7: NAD+-dependent isocitrate dehydrogenase catalytic subunit (EC 1.1.1.286) from Arabidopsis thaliana | 32% id, 87% cov |
IDH3A / P50213: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.286) from Homo sapiens | 32% id, 85% cov |
IDH2 / P28241: isocitrate dehydrogenase [NAD] β subunit (EC 1.1.1.286) from Saccharomyces cerevisiae | 29% id, 90% cov |
IDH1 / P28834: isocitrate dehydrogenase [NAD] α subunit (EC 1.1.1.286) from Saccharomyces cerevisiae | 28% id, 86% cov |
IDH3G / P51553: Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (EC 1.1.1.286) from Homo sapiens | 28% id, 83% cov |
HICDH_THET2 / Q72IW9: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus HICDH_THET8 / Q5SIJ1: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus | 33% id, 71% cov |
IDH3B / O43837: Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial (EC 1.1.1.286) from Homo sapiens | 26% id, 86% cov |
IDH-V / Q945K7: NAD+-dependent isocitrate dehydrogenase catalytic subunit (EC 1.1.1.286) from Arabidopsis thaliana | 37% id, 36% cov |
IDH3A / P50213: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.286) from Homo sapiens | 34% id, 34% cov |
More... |
Pf1N1B4_4412: Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) is similar to: | PaperBLAST |
HICDH_THET2 / Q72IW9: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus HICDH_THET8 / Q5SIJ1: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus | 41% id, 99% cov |
HICDH_PYRHO / O59394: Isocitrate/homoisocitrate dehydrogenase; HICDH; Beta-decarboxylating dehydrogenase; EC 1.1.1.286 from Pyrococcus horikoshii | 37% id, 93% cov |
Q5JFV8: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Thermococcus kodakarensis | 37% id, 92% cov |
IDH2 / P28241: isocitrate dehydrogenase [NAD] β subunit (EC 1.1.1.286) from Saccharomyces cerevisiae | 37% id, 89% cov |
IDH3A / P50213: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.286) from Homo sapiens | 35% id, 89% cov |
IDH1 / P28834: isocitrate dehydrogenase [NAD] α subunit (EC 1.1.1.286) from Saccharomyces cerevisiae | 32% id, 91% cov |
IDH-II / P93032: NAD+-dependent isocitrate dehydrogenase regulatory subunit (EC 1.1.1.286) from Arabidopsis thaliana | 32% id, 89% cov |
IDH-V / Q945K7: NAD+-dependent isocitrate dehydrogenase catalytic subunit (EC 1.1.1.286) from Arabidopsis thaliana | 32% id, 86% cov |
Q4J6C9: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Sulfolobus acidocaldarius | 26% id, 93% cov |
More... |
Pf1N1B4_12: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) is similar to: | PaperBLAST |
HICDH_THET2 / Q72IW9: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus HICDH_THET8 / Q5SIJ1: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus | 39% id, 100% cov |
Q5JFV8: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Thermococcus kodakarensis | 39% id, 79% cov |
HICDH_PYRHO / O59394: Isocitrate/homoisocitrate dehydrogenase; HICDH; Beta-decarboxylating dehydrogenase; EC 1.1.1.286 from Pyrococcus horikoshii | 33% id, 93% cov |
IDH2 / P28241: isocitrate dehydrogenase [NAD] β subunit (EC 1.1.1.286) from Saccharomyces cerevisiae | 34% id, 90% cov |
IDH3A / P50213: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.286) from Homo sapiens | 33% id, 89% cov |
IDH-V / Q945K7: NAD+-dependent isocitrate dehydrogenase catalytic subunit (EC 1.1.1.286) from Arabidopsis thaliana | 33% id, 87% cov |
Q4J6C9: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Sulfolobus acidocaldarius | 31% id, 92% cov |
IDH1 / P28834: isocitrate dehydrogenase [NAD] α subunit (EC 1.1.1.286) from Saccharomyces cerevisiae | 31% id, 90% cov |
IDH-II / P93032: NAD+-dependent isocitrate dehydrogenase regulatory subunit (EC 1.1.1.286) from Arabidopsis thaliana | 30% id, 90% cov |
IDH3G / P51553: Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (EC 1.1.1.286) from Homo sapiens | 31% id, 82% cov |
IDH3B / O43837: Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial (EC 1.1.1.286) from Homo sapiens | 30% id, 84% cov |
More... |
Pf1N1B4_4932: Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) is similar to: | PaperBLAST |
HICDH_THET2 / Q72IW9: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus HICDH_THET8 / Q5SIJ1: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus | 36% id, 99% cov |
HICDH_PYRHO / O59394: Isocitrate/homoisocitrate dehydrogenase; HICDH; Beta-decarboxylating dehydrogenase; EC 1.1.1.286 from Pyrococcus horikoshii | 33% id, 92% cov |
Q5JFV8: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Thermococcus kodakarensis | 34% id, 90% cov |
IDH1 / P28834: isocitrate dehydrogenase [NAD] α subunit (EC 1.1.1.286) from Saccharomyces cerevisiae | 33% id, 91% cov |
IDH-V / Q945K7: NAD+-dependent isocitrate dehydrogenase catalytic subunit (EC 1.1.1.286) from Arabidopsis thaliana | 34% id, 89% cov |
IDH3A / P50213: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.286) from Homo sapiens | 32% id, 90% cov |
IDH2 / P28241: isocitrate dehydrogenase [NAD] β subunit (EC 1.1.1.286) from Saccharomyces cerevisiae | 31% id, 90% cov |
Q4J6C9: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Sulfolobus acidocaldarius | 27% id, 88% cov |
IDH3G / P51553: Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (EC 1.1.1.286) from Homo sapiens | 33% id, 64% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory