Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 1 curated entries in PaperBLAST's database that match '1.1.1.377' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 19 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_3809: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

36% id,
97% cov

Pf1N1B4_451: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

33% id,
99% cov

Pf1N1B4_4671: Short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

33% id,
95% cov

Pf1N1B4_4527: Short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

32% id,
98% cov

Pf1N1B4_1519: 3-oxoacyl-[ACP] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

32% id,
96% cov

Pf1N1B4_4943: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

31% id,
96% cov

Pf1N1B4_5039: Multiple polyol-specific dehydrogenase (EC 1.1.1.-)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

30% id,
98% cov

Pf1N1B4_1687: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

30% id,
96% cov

Pf1N1B4_2449: Probable short-chain dehydrogenase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
98% cov

Pf1N1B4_5633: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
98% cov

Pf1N1B4_3156: Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase RhlG (EC 1.1.1.100)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
97% cov

Pf1N1B4_1271: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

27% id,
98% cov

Pf1N1B4_512: Short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

27% id,
98% cov

Pf1N1B4_4153: Glucose 1-dehydrogenase (EC 1.1.1.47)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

27% id,
97% cov

Pf1N1B4_4954: Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

26% id,
98% cov

Pf1N1B4_1031: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

32% id,
75% cov

Pf1N1B4_2555: Oxidoreductase, short chain dehydrogenase/reductase family
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

27% id,
83% cov

Pf1N1B4_4872: Short-chain dehydrogenase/reductase SDR
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

27% id,
82% cov

Pf1N1B4_4554: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

31% id,
63% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 17 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory