Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 4 curated entries in PaperBLAST's database that match '1.1.1.59'.
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_4450: Choline dehydrogenase (EC 1.1.99.1) is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 59% id, 94% cov |
| Pf1N1B4_2416: Choline dehydrogenase (EC 1.1.99.1) is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 39% id, 94% cov |
| Pf1N1B4_2542: Alcohol dehydrogenase (EC 1.1.1.1) is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 31% id, 94% cov |
| Pf1N1B4_4506: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 29% id, 95% cov |
| Pf1N1B4_3270: Alcohol dehydrogenase (EC 1.1.1.1) is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 32% id, 85% cov |
| Pf1N1B4_4243: Alcohol dehydrogenase (EC 1.1.1.1) is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 28% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4909835-4911535 (frame -2) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 58% id, 95% cov |
| 2738553-2740277 (frame -1) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 39% id, 96% cov |
Lawrence Berkeley National Laboratory