Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 23 curated entries in PaperBLAST's database that match '1.4.3.3' as complete word(s).
These curated entries have 20 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_2817: Glycine oxidase ThiO (EC 1.4.3.19) is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 30% id, 95% cov |
A0A077JN67: D-amino-acid oxidase (EC 1.4.3.3) from Rubrobacter xylanophilus | 28% id, 56% cov |
Q1AYM8: D-amino-acid oxidase (EC 1.4.3.3) from Rubrobacter xylanophilus | 30% id, 43% cov |
| Pf1N1B4_4271: Hydrogen cyanide synthase HcnC / Opine oxidase subunit B is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 27% id, 98% cov |
| Pf1N1B4_3969: Sarcosine oxidase beta subunit (EC 1.5.3.1) is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 26% id, 99% cov |
| Pf1N1B4_2455: Sarcosine oxidase beta subunit (EC 1.5.3.1) is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 23% id, 98% cov |
| Pf1N1B4_4929: Opine oxidase subunit B is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 24% id, 97% cov |
| Pf1N1B4_1383: L-pipecolate oxidase (1.5.3.7) is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 22% id, 93% cov |
| Pf1N1B4_5965: D-amino-acid oxidase (EC 1.4.3.3) is similar to: | PaperBLAST |
A0PFJ3: D-amino-acid oxidase (EC 1.4.3.3) from Zea mays | 28% id, 50% cov |
| Pf1N1B4_1741: Ferredoxin reductase is similar to: | PaperBLAST |
Q1AYM8: D-amino-acid oxidase (EC 1.4.3.3) from Rubrobacter xylanophilus | 36% id, 26% cov |
| Pf1N1B4_2144: D-amino acid dehydrogenase small subunit (EC 1.4.99.1) is similar to: | PaperBLAST |
Q7X2D3: D-amino-acid oxidase (EC 1.4.3.3) from Glutamicibacter protophormiae | 48% id, 13% cov |
P80324: D-amino-acid oxidase (EC 1.4.3.3) from Rhodotorula toruloides | 43% id, 13% cov |
| Pf1N1B4_172: Probable alkylhalidase homolog (EC 3.8.1.1) is similar to: | PaperBLAST |
Q6R4Q9: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis | 55% id, 9% cov |
Q99042: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis | 55% id, 9% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2454515-2455837 (frame +2) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
Q7X2D3: D-amino-acid oxidase (EC 1.4.3.3) from Glutamicibacter protophormiae | 45% id, 15% cov |
P80324: D-amino-acid oxidase (EC 1.4.3.3) from Rhodotorula toruloides | 42% id, 14% cov |
Lawrence Berkeley National Laboratory