Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 61 curated entries in PaperBLAST's database that match '1.8.1.4'.

These curated entries have 45 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4477: Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4)
is similar to:
PaperBLAST

PfGW456L13_3543: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

95% id,
100% cov

AO356_22975: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

92% id,
100% cov

Pf6N2E2_478: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

92% id,
100% cov

More...

Pf1N1B4_3683: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
is similar to:
PaperBLAST

lpdG / GI|1256717: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Pseudomonas putida

91% id,
100% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

84% id,
100% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

84% id,
100% cov

More...

Pf1N1B4_1976: Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
is similar to:
PaperBLAST

A0A0H2ZHZ0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

74% id,
100% cov

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

64% id,
89% cov

DLDH_MESAU / Q811C4: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Mesocricetus auratus

56% id,
95% cov

More...

Pf1N1B4_5014: Glutathione reductase (EC 1.8.1.7)
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

51% id,
89% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

36% id,
95% cov

DLDH_AZOVI / P18925: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Azotobacter vinelandii
GI|142325: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Azotobacter vinelandii

35% id,
96% cov

More...

Pf1N1B4_3919: Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

45% id,
89% cov

DLDH_MESAU / Q811C4: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Mesocricetus auratus

33% id,
95% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

32% id,
97% cov

More...

Pf1N1B4_5967: Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

44% id,
68% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

26% id,
25% cov

Q8MUB0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Bombyx mori

40% id,
10% cov

More...

Pf1N1B4_2457: Sarcosine oxidase alpha subunit (EC 1.5.3.1)
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

35% id,
75% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

23% id,
71% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

23% id,
71% cov

More...

Pf1N1B4_5042: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
is similar to:
PaperBLAST

DLDH1_PSEPU / P09063: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of branched-chain alpha-keto acid dehydrogenase complex; LPD-Val; EC 1.8.1.4 from Pseudomonas putida

27% id,
96% cov

Pf6N2E2_478: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

26% id,
96% cov

A0A0H2ZB32: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

28% id,
78% cov

More...

Pf1N1B4_5010: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)
is similar to:
PaperBLAST

LPD1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Candida albicans

27% id,
69% cov

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

25% id,
72% cov

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

26% id,
67% cov

More...

Pf1N1B4_4393: Ferredoxin reductase
is similar to:
PaperBLAST

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

26% id,
65% cov

Pf6N2E2_478: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

26% id,
66% cov

AO356_22975: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

25% id,
66% cov

More...

Pf1N1B4_3837: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
is similar to:
PaperBLAST

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

27% id,
51% cov

Pf1N1B4_2439: DgcA Dimethylglycine demethylase subunit A
is similar to:
PaperBLAST

DLDH_ECOLI / P0A9P0: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; Glycine cleavage system L protein; EC 1.8.1.4 from Escherichia coli
Lpd / b0116: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
lpd / SP|P0A9P1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Escherichia coli
lpd / P0A9P0: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
P0A9P0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

23% id,
55% cov

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine decarboxylase complex subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Saccharomyces cerevisiae

21% id,
57% cov

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

29% id,
20% cov

Pf1N1B4_1477: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
is similar to:
PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

49% id,
25% cov

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

47% id,
25% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

50% id,
22% cov

More...

Pf1N1B4_4270: Hydrogen cyanide synthase HcnB / Opine oxidase subunit A
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

24% id,
47% cov

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine decarboxylase complex subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Saccharomyces cerevisiae

49% id,
7% cov

Pf1N1B4_4956: Thioredoxin reductase (EC 1.8.1.9)
is similar to:
PaperBLAST

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

26% id,
42% cov

Pf1N1B4_4516: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
is similar to:
PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

27% id,
27% cov

Pf1N1B4_2192: Twin-arginine translocation protein TatB
is similar to:
PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

31% id,
22% cov

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

44% id,
11% cov

Pf1N1B4_1018: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
is similar to:
PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

31% id,
21% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

32% id,
13% cov

Pf1N1B4_3955: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
is similar to:
PaperBLAST

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine decarboxylase complex subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Saccharomyces cerevisiae

23% id,
24% cov

Pf1N1B4_2444: Cholesterol oxidase (EC 1.1.3.6)
is similar to:
PaperBLAST

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

36% id,
13% cov

Pf1N1B4_4059: Thioredoxin reductase (EC 1.8.1.9)
is similar to:
PaperBLAST

P50970: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Zymomonas mobilis

49% id,
8% cov

pdhD / P75393: pyruvate dehydrogenase complex E3 component (EC 1.8.1.4) from Mycoplasma pneumoniae

53% id,
7% cov

PS417_17560: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas simiae

36% id,
9% cov

Pf1N1B4_1046: Thioredoxin reductase (EC 1.8.1.9)
is similar to:
PaperBLAST

P50970: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Zymomonas mobilis

49% id,
8% cov

pdhD / P75393: pyruvate dehydrogenase complex E3 component (EC 1.8.1.4) from Mycoplasma pneumoniae

50% id,
7% cov

A0A0H2ZB32: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

36% id,
9% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory