Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 47 curated entries in PaperBLAST's database that match '2.1.1.13'.

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_5661: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
is similar to:
PaperBLAST

METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli
MetH / b4019: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli
metH: methionine synthase; EC 2.1.1.13 from Escherichia coli
metH / P13009: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli

67% id,
100% cov

METH_RAT / Q9Z2Q4: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Rattus norvegicus
Q9Z2Q4: methionine synthase (EC 2.1.1.13) from Rattus norvegicus

55% id,
99% cov

METH_HUMAN / Q99707: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Homo sapiens
MTR / Q99707: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Homo sapiens
Q99707: methionine synthase (EC 2.1.1.13) from Homo sapiens

55% id,
98% cov

More...

Pf1N1B4_1326: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
is similar to:
PaperBLAST

Q9R9K1: precorrin-3B C17-methyltransferase (EC 2.1.1.131) from Paracoccus denitrificans

54% id,
98% cov

cobJ / P21640: precorrin-3B (C17)-methyltransferase (EC 2.1.1.131) from Sinorhizobium sp.

51% id,
98% cov

Pf1N1B4_1327: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
is similar to:
PaperBLAST

cobI / P21639: CobI (EC 2.1.1.130) from Sinorhizobium sp.

51% id,
96% cov

Pf1N1B4_1331: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
is similar to:
PaperBLAST

GI|151177: precorrin-6Y C(5,15)-methyltransferase (decarboxylating); EC 2.1.1.132 from Pseudomonas denitrificans
cobL / P21921: precorrin-6B (C5,15) methyltransferase subunit (EC 2.1.1.132) from Sinorhizobium sp.

50% id,
97% cov

Pf1N1B4_5658: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
is similar to:
PaperBLAST

cobM / P21922: precorrin-4 (C11)-methyltransferase (EC 2.1.1.133) from Sinorhizobium sp.
P21922: precorrin-4 C11-methyltransferase (EC 2.1.1.133) from Pseudomonas denitrificans

47% id,
98% cov

cobI / P21639: CobI (EC 2.1.1.130) from Sinorhizobium sp.

29% id,
76% cov

Pf1N1B4_4065: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
is similar to:
PaperBLAST

cobI / P21639: CobI (EC 2.1.1.130) from Sinorhizobium sp.

30% id,
96% cov

Pf1N1B4_5773: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
is similar to:
PaperBLAST

cobI / P21639: CobI (EC 2.1.1.130) from Sinorhizobium sp.

32% id,
80% cov

Pf1N1B4_13: SAM-dependent methyltransferase YafE (UbiE paralog)
is similar to:
PaperBLAST

staMB / Q83WF7: 3'-O-demethyl-staurosporine methyltransferase (EC 2.1.1.139) from Streptomyces sp.

26% id,
78% cov

A0A2P1M875: arsenite methyltransferase (EC 2.1.1.137) from Bacillus sp.

28% id,
41% cov

Pf1N1B4_1981: Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79)
is similar to:
PaperBLAST

staMB / Q83WF7: 3'-O-demethyl-staurosporine methyltransferase (EC 2.1.1.139) from Streptomyces sp.

27% id,
69% cov

Pf1N1B4_4955: Methyltransferase
is similar to:
PaperBLAST

staMB / Q83WF7: 3'-O-demethyl-staurosporine methyltransferase (EC 2.1.1.139) from Streptomyces sp.

29% id,
61% cov

ARSM_HALSA / O52025: Arsenite methyltransferase; EC 2.1.1.137 from Halobacterium salinarum

34% id,
42% cov

ARSM_METAC / Q8TJK1: Arsenite methyltransferase; As(III) methyltransferase; EC 2.1.1.137 from Methanosarcina acetivorans

34% id,
41% cov

Pf1N1B4_2490: Biotin synthesis protein BioC
is similar to:
PaperBLAST

ARSM_CLOSP / A0A0D3MJQ5: Arsenite methyltransferase; EC 2.1.1.137 from Clostridium sp.
A0A0D3MJQ5: arsenite methyltransferase (EC 2.1.1.137) from Clostridium sp.

28% id,
62% cov

ARSM_PSEA4 / U2ZU49: Arsenite methyltransferase; EC 2.1.1.137 from Pseudomonas alcaligenes
U2ZU49: arsenite methyltransferase (EC 2.1.1.137) from Pseudomonas alcaligenes

30% id,
58% cov

ARSM_RHOPA / Q6N3Y0: Arsenite methyltransferase; As(III) AdoMet methyltransferase; EC 2.1.1.137 from Rhodopseudomonas palustris
arsM / Q6N3Y0: arsenite methyltransferase (EC 2.1.1.137) from Rhodopseudomonas palustris

31% id,
52% cov

More...

Pf1N1B4_4305: PUTATIVE METHYLTRANSFERASE
is similar to:
PaperBLAST

staMB / Q83WF7: 3'-O-demethyl-staurosporine methyltransferase (EC 2.1.1.139) from Streptomyces sp.

33% id,
50% cov

Pf1N1B4_1562: Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)
is similar to:
PaperBLAST

ARSM_METAC / Q8TJK1: Arsenite methyltransferase; As(III) methyltransferase; EC 2.1.1.137 from Methanosarcina acetivorans

35% id,
44% cov

staMB / Q83WF7: 3'-O-demethyl-staurosporine methyltransferase (EC 2.1.1.139) from Streptomyces sp.

26% id,
57% cov

ARSM_RHOPA / Q6N3Y0: Arsenite methyltransferase; As(III) AdoMet methyltransferase; EC 2.1.1.137 from Rhodopseudomonas palustris
arsM / Q6N3Y0: arsenite methyltransferase (EC 2.1.1.137) from Rhodopseudomonas palustris

37% id,
40% cov

Pf1N1B4_1515: FIG025233: SAM-dependent methyltransferases
is similar to:
PaperBLAST

ARSM_METAC / Q8TJK1: Arsenite methyltransferase; As(III) methyltransferase; EC 2.1.1.137 from Methanosarcina acetivorans

25% id,
61% cov

ARSM_PSEA4 / U2ZU49: Arsenite methyltransferase; EC 2.1.1.137 from Pseudomonas alcaligenes
U2ZU49: arsenite methyltransferase (EC 2.1.1.137) from Pseudomonas alcaligenes

27% id,
50% cov

ARSM_RHOPA / Q6N3Y0: Arsenite methyltransferase; As(III) AdoMet methyltransferase; EC 2.1.1.137 from Rhodopseudomonas palustris
arsM / Q6N3Y0: arsenite methyltransferase (EC 2.1.1.137) from Rhodopseudomonas palustris

32% id,
37% cov

Pf1N1B4_356: 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)
is similar to:
PaperBLAST

ARSM_PSEA4 / U2ZU49: Arsenite methyltransferase; EC 2.1.1.137 from Pseudomonas alcaligenes
U2ZU49: arsenite methyltransferase (EC 2.1.1.137) from Pseudomonas alcaligenes

33% id,
34% cov

AS3MT_RAT / Q8VHT6: Arsenite methyltransferase; Methylarsonite methyltransferase; S-adenosyl-L-methionine:arsenic(III) methyltransferase; EC 2.1.1.137 from Rattus norvegicus
Q8VHT6: arsenite methyltransferase (EC 2.1.1.137) from Rattus norvegicus

31% id,
32% cov

Pf1N1B4_2014: Homocysteine S-methyltransferase (EC 2.1.1.10)
is similar to:
PaperBLAST

DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris

32% id,
34% cov

Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima

25% id,
36% cov

METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli
MetH / b4019: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli
metH: methionine synthase; EC 2.1.1.13 from Escherichia coli
metH / P13009: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli

27% id,
25% cov

Pf1N1B4_3834: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
is similar to:
PaperBLAST

cobI / P21639: CobI (EC 2.1.1.130) from Sinorhizobium sp.

76% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 17 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory