Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 12 curated entries in PaperBLAST's database that match '2.3.1.109' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_3443: Arginine N-succinyltransferase (EC 2.3.1.109)
is similar to:
PaperBLAST

aruG / P80358: arginine succinyltransferase β subunit (EC 2.3.1.109) from Pseudomonas aeruginosa
P80358: arginine N-succinyltransferase (EC 2.3.1.109) from Pseudomonas aeruginosa

86% id,
100% cov

ASTA_ECOLI / P0AE37: Arginine N-succinyltransferase; AST; AOST; EC 2.3.1.109 from Escherichia coli
YdjV / b1747: arginine N-succinyltransferase (EC 2.3.1.109) from Escherichia coli
astA / P0AE37: arginine N-succinyltransferase (EC 2.3.1.109) from Escherichia coli

50% id,
99% cov

ASTA_SALTY / Q8ZPV1: Arginine N-succinyltransferase; AST; AOST; EC 2.3.1.109 from Salmonella typhimurium

50% id,
99% cov

More...

Pf1N1B4_3442: Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109)
is similar to:
PaperBLAST

astA / GI|2654610: arginine N-succinyltransferase; EC 2.3.1.109 from Pseudomonas aeruginosa
aruF / P80357: arginine succinyltransferase α subunit (EC 2.3.1.109) from Pseudomonas aeruginosa

85% id,
100% cov

HP15_3041: Arginine N-succinyltransferase (EC 2.3.1.109) from Marinobacter adhaerens

39% id,
100% cov

Sama_3010: Arginine N-succinyltransferase (EC 2.3.1.109) from Shewanella amazonensis

39% id,
100% cov

More...

Pf1N1B4_4797: Arginine N-succinyltransferase (EC 2.3.1.109)
is similar to:
PaperBLAST

aruG / P80358: arginine succinyltransferase β subunit (EC 2.3.1.109) from Pseudomonas aeruginosa
P80358: arginine N-succinyltransferase (EC 2.3.1.109) from Pseudomonas aeruginosa

72% id,
100% cov

ASTA_SALTY / Q8ZPV1: Arginine N-succinyltransferase; AST; AOST; EC 2.3.1.109 from Salmonella typhimurium

49% id,
99% cov

ASTA_ECOLI / P0AE37: Arginine N-succinyltransferase; AST; AOST; EC 2.3.1.109 from Escherichia coli
YdjV / b1747: arginine N-succinyltransferase (EC 2.3.1.109) from Escherichia coli
astA / P0AE37: arginine N-succinyltransferase (EC 2.3.1.109) from Escherichia coli

48% id,
100% cov

More...

Pf1N1B4_5857: Arginine N-succinyltransferase (EC 2.3.1.109)
is similar to:
PaperBLAST

aruG / P80358: arginine succinyltransferase β subunit (EC 2.3.1.109) from Pseudomonas aeruginosa
P80358: arginine N-succinyltransferase (EC 2.3.1.109) from Pseudomonas aeruginosa

65% id,
100% cov

ASTA_ECOLI / P0AE37: Arginine N-succinyltransferase; AST; AOST; EC 2.3.1.109 from Escherichia coli
YdjV / b1747: arginine N-succinyltransferase (EC 2.3.1.109) from Escherichia coli
astA / P0AE37: arginine N-succinyltransferase (EC 2.3.1.109) from Escherichia coli

45% id,
100% cov

ASTA_SALTY / Q8ZPV1: Arginine N-succinyltransferase; AST; AOST; EC 2.3.1.109 from Salmonella typhimurium

45% id,
97% cov

More...

Pf1N1B4_5856: Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109)
is similar to:
PaperBLAST

astA / GI|2654610: arginine N-succinyltransferase; EC 2.3.1.109 from Pseudomonas aeruginosa
aruF / P80357: arginine succinyltransferase α subunit (EC 2.3.1.109) from Pseudomonas aeruginosa

59% id,
100% cov

Sama_3010: Arginine N-succinyltransferase (EC 2.3.1.109) from Shewanella amazonensis

38% id,
100% cov

aruG / P80358: arginine succinyltransferase β subunit (EC 2.3.1.109) from Pseudomonas aeruginosa
P80358: arginine N-succinyltransferase (EC 2.3.1.109) from Pseudomonas aeruginosa

37% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory