Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 18 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4786: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
is similar to:
PaperBLAST

AO353_25685: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Pseudomonas fluorescens

94% id,
100% cov

PfGW456L13_2982: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Pseudomonas fluorescens

92% id,
100% cov

Mpe_A3367 / A2SL81: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methylibium petroleiphilum

63% id,
99% cov

More...

Pf1N1B4_3904: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
is similar to:
PaperBLAST

P28790: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Pseudomonas fragi

95% id,
98% cov

fadA / Q88L01: FadA (EC 2.3.1.16; EC 2.3.1.9) from Pseudomonas putida

93% id,
98% cov

fadA / Q9HZJ3: fatty acid oxidation complex β subunit (EC 2.3.1.16) from Pseudomonas aeruginosa

91% id,
98% cov

More...

Pf1N1B4_3234: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

89% id,
100% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

47% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

46% id,
100% cov

More...

Pf1N1B4_5835: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
is similar to:
PaperBLAST

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

86% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

68% id,
100% cov

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

65% id,
100% cov

More...

Pf1N1B4_5133: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
is similar to:
PaperBLAST

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator
Q0KBP1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Cupriavidus necator

61% id,
99% cov

thlA1 / A5N3I5: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Clostridium kluyveri

50% id,
99% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

49% id,
98% cov

More...

Pf1N1B4_371: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
is similar to:
PaperBLAST

FADA_BACSU / O32177: 3-ketoacyl-CoA thiolase; Acetyl-CoA acyltransferase; Beta-ketothiolase; EC 2.3.1.16 from Bacillus subtilis

46% id,
100% cov

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

41% id,
100% cov

P28790: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Pseudomonas fragi

41% id,
98% cov

More...

Pf1N1B4_3795: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
is similar to:
PaperBLAST

fadA / A0A140NDQ6: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli

40% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

39% id,
100% cov

FADA_ECOLI / P21151: 3-ketoacyl-CoA thiolase FadA; Acetyl-CoA acyltransferase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta; EC 2.3.1.16 from Escherichia coli
OldA / b3845: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli
fadA / P21151: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli
P21151: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Escherichia coli

39% id,
100% cov

More...

Pf1N1B4_5589: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
is similar to:
PaperBLAST

G3CH53: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Ovis aries

40% id,
98% cov

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

39% id,
99% cov

THIM_HUMAN / P42765: 3-ketoacyl-CoA thiolase, mitochondrial; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; Acyl-CoA hydrolase, mitochondrial; Beta-ketothiolase; Mitochondrial 3-oxoacyl-CoA thiolase; T1; EC 2.3.1.16; EC 2.3.1.9; EC 3.1.2.-; EC 3.1.2.1; EC 3.1.2.2 from Homo sapiens
ACAA2 / P42765: 3-ketoacyl-CoA thiolase, mitochondrial (EC 2.3.1.16) from Homo sapiens
P42765: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Homo sapiens

39% id,
98% cov

More...

Pf1N1B4_1270: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
is similar to:
PaperBLAST

FADI_ECOLI / P76503: 3-ketoacyl-CoA thiolase FadI; ACSs; Acetyl-CoA acyltransferase; Acyl-CoA ligase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta; EC 2.3.1.16 from Escherichia coli
FadI / b2342: 3-ketoacyl-CoA thiolase FadI (EC 2.3.1.16) from Escherichia coli
fadI / P76503: 3-ketoacyl-CoA thiolase FadI (EC 2.3.1.16) from Escherichia coli
fadI / A0A140N9I7: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli

39% id,
97% cov

fadA / Q5P5K2: 3-keto-acyl-CoA-thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

35% id,
99% cov

ECHB_HUMAN / P55084: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Homo sapiens
HADHB / P55084: mitochondrial trifunctional enzyme β subunit (EC 2.3.1.16) from Homo sapiens

36% id,
89% cov

More...

Pf1N1B4_3903: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
94% cov

Pf1N1B4_3796: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
61% cov

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

36% id,
23% cov

Pf1N1B4_320: 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
is similar to:
PaperBLAST

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

25% id,
79% cov

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

43% id,
12% cov

Pf1N1B4_4551: 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
is similar to:
PaperBLAST

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator
Q0KBP1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Cupriavidus necator

26% id,
74% cov

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

32% id,
28% cov

Pf1N1B4_1787: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

33% id,
52% cov

Pf1N1B4_5134: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

37% id,
37% cov

Pf1N1B4_4788: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
30% cov

Pf1N1B4_4777: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

31% id,
24% cov

Pf1N1B4_4549: 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

42% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 18 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory