Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 120 curated entries in PaperBLAST's database that match '2.4.2.2'.
These curated entries have 82 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_2150: Xanthine phosphoribosyltransferase (EC 2.4.2.22) is similar to: | PaperBLAST |
XPT_BACSU / P42085: Xanthine phosphoribosyltransferase; XPRTase; EC 2.4.2.22 from Bacillus subtilis | 73% id, 98% cov |
XPT_ENTFA / Q831Y0: Xanthine phosphoribosyltransferase; XPRTase; EC 2.4.2.22 from Enterococcus faecalis | 57% id, 98% cov |
| Pf1N1B4_3006: tRNA-guanine transglycosylase (EC 2.4.2.29) is similar to: | PaperBLAST |
TGT_ECOLI / P0A847: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Escherichia coli | 70% id, 99% cov |
Q54177: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Shigella flexneri | 70% id, 99% cov |
tgt / Q183P1: preQ1 tRNA-ribosyltransferase (EC 2.4.2.29) from Clostridioides difficile | 55% id, 99% cov |
| Pf1N1B4_2823: COG1496: Uncharacterized conserved protein is similar to: | PaperBLAST |
PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli | 57% id, 100% cov |
PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus | 35% id, 93% cov |
PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron | 31% id, 93% cov |
| Pf1N1B4_227: FIG074102: hypothetical protein is similar to: | PaperBLAST |
PPNP_ECOLI / P0C037: Pyrimidine/purine nucleoside phosphorylase; Adenosine phosphorylase; Cytidine phosphorylase; Guanosine phosphorylase; Inosine phosphorylase; Thymidine phosphorylase; Uridine phosphorylase; Xanthosine phosphorylase; EC 2.4.2.1; EC 2.4.2.2 from Escherichia coli | 54% id, 99% cov |
A0A080UUN2: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Serratia marcescens | 53% id, 97% cov |
| Pf1N1B4_3713: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) is similar to: | PaperBLAST |
cobT / A0A1D9FP51: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Clostridium formicaceticum | 41% id, 97% cov |
cobT / A0A0K1TPX5: nicotinate-nucleotide--5-methoxybenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Moorella thermoacetica | 43% id, 94% cov |
cobT / P29935: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase subunit (EC 2.4.2.21) from Sinorhizobium sp. | 41% id, 93% cov |
| Pf1N1B4_3708: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family is similar to: | PaperBLAST |
D7GJ95: aerobic 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii | 42% id, 34% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4116962-4117687 (frame +2) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
D7GJ95: aerobic 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii | 41% id, 35% cov |
Lawrence Berkeley National Laboratory