Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 66 curated entries in PaperBLAST's database that match '2.4.2.4'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_227: FIG074102: hypothetical protein is similar to: | PaperBLAST |
PpnP / b0391: nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli | 54% id, 99% cov |
| Pf1N1B4_3006: tRNA-guanine transglycosylase (EC 2.4.2.29) is similar to: | PaperBLAST |
Q8THU2: tRNA-guanosine34 preQ1 transglycosylase (subunit 2/2) (EC 2.4.2.29); tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Methanosarcina acetivorans | 26% id, 66% cov |
ATGT_METJA / Q57878: tRNA-guanine(15) transglycosylase; 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Archaeal tRNA-guanine transglycosylase; EC 2.4.2.48 from Methanocaldococcus jannaschii | 26% id, 51% cov |
Q9HI54: tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Thermoplasma acidophilum | 26% id, 50% cov |
| Pf1N1B4_4067: Anthranilate phosphoribosyltransferase like (EC 2.4.2.18) is similar to: | PaperBLAST |
Q99N42: thymidine phosphorylase (EC 2.4.2.4) from Mus musculus | 27% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4343984-4344076 (frame +2) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
MTIP_PSEAE / Q9HZK1: S-methyl-5'-thioinosine phosphorylase; 5'-methylthioinosine phosphorylase; MTI phosphorylase; MTIP; EC 2.4.2.44 from Pseudomonas aeruginosa | 82% id, 9% cov |
| 5313397-5314404 (frame -3) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
ARNT_YERPS / Q66A06: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Polymyxin resistance protein PmrK; Undecaprenyl phosphate-alpha-L-Ara4N transferase; EC 2.4.2.43 from Yersinia pseudotuberculosis | 33% id, 13% cov |
Lawrence Berkeley National Laboratory