Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 16 curated entries in PaperBLAST's database that match '2.5.1.49'.

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4890: Cystathionine gamma-lyase (EC 4.4.1.1)
is similar to:
PaperBLAST

Ga0059261_3194: O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) from Sphingomonas koreensis

37% id,
96% cov

oah / Q2RWB7: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Rhodospirillum rubrum

36% id,
96% cov

L7N4M1: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Mycobacterium tuberculosis

40% id,
53% cov

More...

Pf1N1B4_4430: Cystathionine beta-lyase (EC 4.4.1.8)
is similar to:
PaperBLAST

Q7M844: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Wolinella succinogenes

25% id,
99% cov

METY_CORGL / Q79VI4: O-acetyl-L-homoserine sulfhydrylase; OAH-sulfhydrylase; EC 2.5.1.49 from Corynebacterium glutamicum
metY / Q79VI4: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) from Corynebacterium glutamicum

30% id,
61% cov

metY / P94890: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) from Leptospira meyeri
P94890: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Leptospira meyeri

26% id,
70% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory