Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 3 curated entries in PaperBLAST's database that match '2.6.1.84' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4996: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

71% id,
99% cov

Pf1N1B4_5070: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

36% id,
97% cov

Pf1N1B4_4425: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

33% id,
100% cov

Pf1N1B4_849: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

35% id,
89% cov

Pf1N1B4_3080: N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

33% id,
89% cov

Pf1N1B4_2863: Valine--pyruvate aminotransferase (EC 2.6.1.66)
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

31% id,
93% cov

Pf1N1B4_4186: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

33% id,
83% cov

Pf1N1B4_4946: putative aminotransferase
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

28% id,
96% cov

Pf1N1B4_555: Uncharacterized PLP-dependent aminotransferase YfdZ
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

29% id,
91% cov

Pf1N1B4_261: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

28% id,
90% cov

Pf1N1B4_386: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

25% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory