Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 97 curated entries in PaperBLAST's database that match '2.7.1.17'.

These curated entries have 61 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4845: Xylulose kinase (EC 2.7.1.17)
is similar to:
PaperBLAST

Pf6N2E2_805: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

85% id,
100% cov

AO356_27695: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

85% id,
100% cov

mtlY / Q4KC52: xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

72% id,
100% cov

More...

Pf1N1B4_2562: Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-)
is similar to:
PaperBLAST

ANMK_PSEPK / Q88QQ4: Anhydro-N-acetylmuramic acid kinase; AnhMurNAc kinase; EC 2.7.1.170 from Pseudomonas putida

74% id,
100% cov

ANMK_PSEAE / Q9I5Q5: Anhydro-N-acetylmuramic acid kinase; AnhMurNAc kinase; EC 2.7.1.170 from Pseudomonas aeruginosa
anmK / Q9I5Q5: anhydro-N-acetylmuramic acid kinase monomer (EC 2.7.1.170) from Pseudomonas aeruginosa
Q9I5Q5: anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) from Pseudomonas aeruginosa

68% id,
100% cov

ANMK_ECOLI / P77570: Anhydro-N-acetylmuramic acid kinase; AnhMurNAc kinase; EC 2.7.1.170 from Escherichia coli
YdhH / b1640: anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) from Escherichia coli
anmK / P77570: anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) from Escherichia coli
P77570: anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) from Escherichia coli

50% id,
98% cov

More...

Pf1N1B4_5638: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
is similar to:
PaperBLAST

YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli
kdgK / P37647: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178) from Escherichia coli

52% id,
98% cov

kdgK / P45416: 2-dehydro-3-deoxy-D-gluconate kinase (EC 2.7.1.178) from Dickeya dadantii

52% id,
98% cov

KDGK_SACS2 / Q97U29: 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxy-galactonokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; KDGal kinase; EC 2.7.1.178 from Saccharolobus solfataricus
kdgK / Q97U29: 2-dehydro-3-deoxyglucono/2-dehydro-3-deoxygalactonokinase monomer (EC 2.7.1.178) from Saccharolobus solfataricus
Q97U29: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178) from Saccharolobus solfataricus

21% id,
93% cov

Pf1N1B4_400: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
is similar to:
PaperBLAST

YidV / b3693: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178; EC 2.7.1.58) from Escherichia coli
dgoK / P31459: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178) from Escherichia coli

33% id,
100% cov

Pf1N1B4_4677: Trehalose synthase (EC 5.4.99.16)
is similar to:
PaperBLAST

MAK_ACTMI / Q7WUM3: Maltokinase; MaK; Maltose-1-phosphate synthase; EC 2.7.1.175 from Actinoplanes missouriensis
Q7WUM3: maltokinase (EC 2.7.1.175) from Actinoplanes missouriensis

33% id,
100% cov

A1TH50: maltokinase (EC 2.7.1.175) from Mycolicibacterium vanbaalenii

33% id,
99% cov

MAK1_MYCTU / O07177: Maltokinase; MaK; Maltose-1-phosphate synthase; EC 2.7.1.175 from Mycobacterium tuberculosis
mak / O07177: maltokinase (EC 2.7.1.175) from Mycobacterium tuberculosis
O07177: maltokinase (EC 2.7.1.175) from Mycobacterium tuberculosis

32% id,
98% cov

More...

Pf1N1B4_4765: 2-ketogluconate kinase (EC 2.7.1.13)
is similar to:
PaperBLAST

KDGK_SACS2 / Q97U29: 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxy-galactonokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; KDGal kinase; EC 2.7.1.178 from Saccharolobus solfataricus
kdgK / Q97U29: 2-dehydro-3-deoxyglucono/2-dehydro-3-deoxygalactonokinase monomer (EC 2.7.1.178) from Saccharolobus solfataricus
Q97U29: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178) from Saccharolobus solfataricus

30% id,
96% cov

D4GR05: 6-phosphofructokinase (EC 2.7.1.11); 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) from Haloferax volcanii

29% id,
87% cov

KDGK1_HALVD / D4GSE6: 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxygluconate/2-keto-3-deoxygalactonate kinase; KDG kinase; KDGK-1; EC 2.7.1.178 from Haloferax volcanii
D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

26% id,
98% cov

Pf1N1B4_3709: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
is similar to:
PaperBLAST

Q8PVB2: L-threonine kinase (EC 2.7.1.177); threonine-phosphate decarboxylase (EC 4.1.1.81) from Methanosarcina mazei

31% id,
82% cov

Pf1N1B4_767: Glycerol kinase (EC 2.7.1.30)
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

26% id,
93% cov

XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis

25% id,
97% cov

PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens

24% id,
90% cov

Pf1N1B4_6031: Ribokinase (EC 2.7.1.15)
is similar to:
PaperBLAST

KDGK1_HALVD / D4GSE6: 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxygluconate/2-keto-3-deoxygalactonate kinase; KDG kinase; KDGK-1; EC 2.7.1.178 from Haloferax volcanii
D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

24% id,
93% cov

kdgK / P45416: 2-dehydro-3-deoxy-D-gluconate kinase (EC 2.7.1.178) from Dickeya dadantii

22% id,
96% cov

YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli
kdgK / P37647: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178) from Escherichia coli

31% id,
29% cov

Pf1N1B4_3710: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
is similar to:
PaperBLAST

MmCobD / Q8PVB1: MmCobD (EC 4.1.1.81; EC 2.7.1.177) from Methanosarcina mazei

26% id,
66% cov

Pf1N1B4_261: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

MmCobD / Q8PVB1: MmCobD (EC 4.1.1.81; EC 2.7.1.177) from Methanosarcina mazei

26% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory