Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39'.
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
Pf1N1B4_1873: Homoserine kinase (EC 2.7.1.39) is similar to: | PaperBLAST |
KHSE_PSEAE / P29364: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Pseudomonas aeruginosa | 71% id, 100% cov |
Ga0059261_3253: homoserine kinase (EC 2.7.1.39) from Sphingomonas koreensis | 35% id, 96% cov |
Pf1N1B4_1538: Shikimate kinase I (EC 2.7.1.71) is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 35% id, 77% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1774364-1774891 (frame -2) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 35% id, 79% cov |
Lawrence Berkeley National Laboratory