Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 171 curated entries in PaperBLAST's database that match '2.7.1.4'.

These curated entries have 131 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4844: Fructokinase (EC 2.7.1.4)
is similar to:
PaperBLAST

PfGW456L13_3036: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

89% id,
99% cov

AO353_25910: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

87% id,
99% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

37% id,
99% cov

More...

Pf1N1B4_678: Pyruvate kinase (EC 2.7.1.40)
is similar to:
PaperBLAST

PykA / b1854: pyruvate kinase II (EC 2.7.1.40) from Escherichia coli
pykA / P21599: pyruvate kinase II (EC 2.7.1.40) from Escherichia coli

58% id,
99% cov

KPYK2_SALTY / Q8ZNW0: Pyruvate kinase II; PK-2; EC 2.7.1.40 from Salmonella typhimurium

58% id,
99% cov

KPYK_MYCTU / P9WKE5: Pyruvate kinase; PK; EC 2.7.1.40 from Mycobacterium tuberculosis

40% id,
100% cov

More...

Pf1N1B4_5638: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
is similar to:
PaperBLAST

KDGK_ECOLI / P37647: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Escherichia coli
YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli

52% id,
98% cov

KDGK_ECOLW / E0J5J4: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Escherichia coli

52% id,
98% cov

KDGK_DICD3 / P45416: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Dickeya dadantii

52% id,
98% cov

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Pf1N1B4_4765: 2-ketogluconate kinase (EC 2.7.1.13)
is similar to:
PaperBLAST

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

52% id,
96% cov

RR42_RS28860: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus basilensis

34% id,
100% cov

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

33% id,
96% cov

More...

Pf1N1B4_3657: Pyruvate kinase (EC 2.7.1.40)
is similar to:
PaperBLAST

KPYK_MYCTU / P9WKE5: Pyruvate kinase; PK; EC 2.7.1.40 from Mycobacterium tuberculosis

41% id,
99% cov

PykA / b1854: pyruvate kinase II (EC 2.7.1.40) from Escherichia coli
pykA / P21599: pyruvate kinase II (EC 2.7.1.40) from Escherichia coli

38% id,
99% cov

KPYK2_SALTY / Q8ZNW0: Pyruvate kinase II; PK-2; EC 2.7.1.40 from Salmonella typhimurium

38% id,
99% cov

More...

Pf1N1B4_6031: Ribokinase (EC 2.7.1.15)
is similar to:
PaperBLAST

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

29% id,
99% cov

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

29% id,
99% cov

N515DRAFT_1919: Fructokinase (EC 2.7.1.4) from Dyella japonica

27% id,
98% cov

More...

Pf1N1B4_4274: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain
is similar to:
PaperBLAST

KDGK_THETE / Q704D0: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermoproteus tenax

29% id,
100% cov

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

28% id,
100% cov

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

28% id,
94% cov

More...

Pf1N1B4_2718: Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7)
is similar to:
PaperBLAST

THID_ECOLI / P76422: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7 from Escherichia coli
ThiJ / b2103: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.7.4.7) from Escherichia coli
thiD / P76422: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.7.4.7) from Escherichia coli
P76422: hydroxymethylpyrimidine kinase (EC 2.7.1.49) from Escherichia coli

32% id,
89% cov

THID_SALTY / P55882: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7 from Salmonella typhimurium
P55882: hydroxymethylpyrimidine kinase (EC 2.7.1.49) from Salmonella enterica

31% id,
89% cov

P66915: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7) from Staphylococcus aureus

29% id,
86% cov

More...

Pf1N1B4_4845: Xylulose kinase (EC 2.7.1.17)
is similar to:
PaperBLAST

PSK_SYNE7 / Q31KC7: D-ribulose kinase; D-ribulokinase; Probable sugar kinase; SePSK; EC 2.7.1.47 from Synechococcus elongatus

27% id,
96% cov

BT1275: L-fuculose kinase fucK (EC 2.7.1.51); D-ribulose kinase (EC 2.7.1.47) from Bacteroides thetaiotaomicron

22% id,
96% cov

FGGY_HUMAN / Q96C11: FGGY carbohydrate kinase domain-containing protein; D-ribulokinase FGGY; EC 2.7.1.47 from Homo sapiens
FGGY / Q96C11: FGGY carbohydrate kinase domain-containing protein (EC 2.7.1.47) from Homo sapiens

31% id,
21% cov

Pf1N1B4_405: Carbohydrate kinase, PfkB family
is similar to:
PaperBLAST

O04897: fructokinase (EC 2.7.1.4) from Solanum lycopersicum

28% id,
89% cov

KDGK_THETE / Q704D0: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermoproteus tenax

23% id,
96% cov

Pf1N1B4_2000: Pyridoxal kinase (EC 2.7.1.35)
is similar to:
PaperBLAST

PdxL / b2418: pyridoxal kinase I (EC 2.7.1.35; EC 2.7.1.49) from Escherichia coli
pdxK / P40191: pyridoxine/pyridoxal/pyridoxamine kinase (EC 2.7.1.35; EC 2.7.1.49) from Escherichia coli

27% id,
92% cov

Pf1N1B4_1145: 1-phosphofructokinase (EC 2.7.1.56)
is similar to:
PaperBLAST

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

25% id,
88% cov

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

29% id,
51% cov

C4M2I2: fructokinase (EC 2.7.1.4) from Entamoeba histolytica

27% id,
36% cov

More...

Pf1N1B4_2717: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
is similar to:
PaperBLAST

TPS1_BRANA / O48881: Thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic; EC 2.5.1.3; EC 2.7.1.49 from Brassica napus
O48881: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7) from Brassica napus

40% id,
36% cov

TPS1L_ARATH / Q5M731: Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic; EC 2.5.1.3; EC 2.7.1.49 from Arabidopsis thaliana
TH1 / Q5M731: 4-amino-2-methyl-5-phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.5.1.3; EC 2.7.4.7) from Arabidopsis thaliana

37% id,
39% cov

Pf1N1B4_2934: Uracil phosphoribosyltransferase (EC 2.4.2.9)
is similar to:
PaperBLAST

UKL1_ARATH / Q9FKS0: Uridine kinase-like protein 1, chloroplastic; EC 2.7.1.48; EC 2.4.2.9 from Arabidopsis thaliana
Q9FKS0: uracil phosphoribosyltransferase (EC 2.4.2.9); uridine kinase (EC 2.7.1.48) from Arabidopsis thaliana

34% id,
42% cov

UKL2_ARATH / Q9LK34: Uridine kinase-like protein 2, chloroplastic; EC 2.7.1.48; EC 2.4.2.9 from Arabidopsis thaliana

33% id,
41% cov

UKL5_ARATH / Q9LTY6: Uridine kinase-like protein 5; EC 2.7.1.48; EC 2.4.2.9 from Arabidopsis thaliana

32% id,
42% cov

More...

Pf1N1B4_3826: Phosphoenolpyruvate synthase (EC 2.7.9.2)
is similar to:
PaperBLAST

KPYK_GEOSE / Q02499: Pyruvate kinase; PK; ATP:pyruvate 2-O-phosphotransferase; EC 2.7.1.40 from Geobacillus stearothermophilus
Q02499: pyruvate kinase (EC 2.7.1.40) from Geobacillus stearothermophilus

25% id,
50% cov

P51181: pyruvate kinase (EC 2.7.1.40) from Bacillus licheniformis

34% id,
25% cov

Q6GG09: pyruvate kinase (EC 2.7.1.40) from Staphylococcus aureus

30% id,
23% cov

Pf1N1B4_1455: ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase
is similar to:
PaperBLAST

N515DRAFT_1919: Fructokinase (EC 2.7.1.4) from Dyella japonica

29% id,
35% cov

Pf1N1B4_833: PTS system, glucose-specific IIA component / Phosphotransferase system, phosphocarrier protein HPr / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
is similar to:
PaperBLAST

P51182: pyruvate kinase (EC 2.7.1.40) from Sporosarcina psychrophila

30% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 17 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3054380-3055411 (frame -2) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon
is similar to:
PaperBLAST

THID_ECOLI / P76422: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7 from Escherichia coli
ThiJ / b2103: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.7.4.7) from Escherichia coli
thiD / P76422: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.7.4.7) from Escherichia coli
P76422: hydroxymethylpyrimidine kinase (EC 2.7.1.49) from Escherichia coli
Also see hits to annotated proteins above

34% id,
94% cov

THID_SALTY / P55882: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7 from Salmonella typhimurium
P55882: hydroxymethylpyrimidine kinase (EC 2.7.1.49) from Salmonella enterica
Also see hits to annotated proteins above

33% id,
94% cov

THID_BACSU / O31620: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7 from Bacillus subtilis
thiD / O31620: 4-amino-2-methyl-5-phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.7.4.7) from Bacillus subtilis

32% id,
94% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory