Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 135 curated entries in PaperBLAST's database that match '2.7.1.6'.

These curated entries have 100 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_836: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
is similar to:
PaperBLAST

scrA / GB|AAN59464.1: PTS system, sucrose-specific, EIIBCA component; EC 2.7.1.69 from Streptococcus mutans

41% id,
71% cov

malX / RF|NP_416138.1: PTS system maltose- and glucose-specific EIICB component; EC 2.7.1.69 from Escherichia coli

41% id,
13% cov

Pf1N1B4_1145: 1-phosphofructokinase (EC 2.7.1.56)
is similar to:
PaperBLAST

MIK_ORYSJ / Q84R36: Inositol 3-kinase; Myo-inositol kinase; OsMIK; Protein LOW PHYTIC ACID; EC 2.7.1.64 from Oryza sativa

30% id,
47% cov

MIK_MAIZE / Q5GA22: Inositol 3-kinase; Myo-inositol kinase; Protein LOW PHYTIC ACID 3; EC 2.7.1.64 from Zea mays
lpa3 / Q5GA22: myo-inositol kinase (EC 2.7.1.64) from Zea mays

30% id,
40% cov

Pf1N1B4_6031: Ribokinase (EC 2.7.1.15)
is similar to:
PaperBLAST

MIK_ORYSJ / Q84R36: Inositol 3-kinase; Myo-inositol kinase; OsMIK; Protein LOW PHYTIC ACID; EC 2.7.1.64 from Oryza sativa

30% id,
43% cov

MIK_MAIZE / Q5GA22: Inositol 3-kinase; Myo-inositol kinase; Protein LOW PHYTIC ACID 3; EC 2.7.1.64 from Zea mays
lpa3 / Q5GA22: myo-inositol kinase (EC 2.7.1.64) from Zea mays

28% id,
44% cov

MIK_ARATH / Q93Z01: Inositol 3-kinase; Myo-inositol kinase; AtMIK; EC 2.7.1.64 from Arabidopsis thaliana

30% id,
22% cov

Pf1N1B4_4257: L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17) @ Threonine dehydratase biosynthetic (EC 4.3.1.19)
is similar to:
PaperBLAST

Q9K3S8: galactokinase (EC 2.7.1.6) from Streptomyces coelicolor

26% id,
42% cov

Pf1N1B4_2824: ClpB protein
is similar to:
PaperBLAST

C4LSF7: 1-phosphatidylinositol-4-phosphate 5-kinase (EC 2.7.1.68) from Entamoeba histolytica

24% id,
41% cov

Pf1N1B4_633: TolA protein
is similar to:
PaperBLAST

C4LSF7: 1-phosphatidylinositol-4-phosphate 5-kinase (EC 2.7.1.68) from Entamoeba histolytica

23% id,
43% cov

Pf1N1B4_2680: MORN repeat family protein
is similar to:
PaperBLAST

PI5K1_ARATH / Q56YP2: Phosphatidylinositol 4-phosphate 5-kinase 1; AtPIP5K1; 1-phosphatidylinositol 4-phosphate kinase 1; Diphosphoinositide kinase 1; PtdIns(4)P-5-kinase 1; EC 2.7.1.68 from Arabidopsis thaliana
Q56YP2: 1-phosphatidylinositol-4-phosphate 5-kinase (EC 2.7.1.68) from Arabidopsis thaliana

30% id,
29% cov

PI5K9_ARATH / Q8L850: Phosphatidylinositol 4-phosphate 5-kinase 9; AtPIP5K9; 1-phosphatidylinositol 4-phosphate kinase 9; Diphosphoinositide kinase 9; PtdIns(4)P-5-kinase 9; EC 2.7.1.68 from Arabidopsis thaliana
Q8L850: 1-phosphatidylinositol-4-phosphate 5-kinase (EC 2.7.1.68) from Arabidopsis thaliana

29% id,
27% cov

PI5K3_ARATH / O48709: Phosphatidylinositol 4-phosphate 5-kinase 3; AtPIP5K3; 1-phosphatidylinositol 4-phosphate kinase 3; Diphosphoinositide kinase 3; PtdIns(4)P-5-kinase 3; EC 2.7.1.68 from Arabidopsis thaliana
O48709: 1-phosphatidylinositol-4-phosphate 5-kinase (EC 2.7.1.68) from Arabidopsis thaliana

33% id,
23% cov

More...

Pf1N1B4_833: PTS system, glucose-specific IIA component / Phosphotransferase system, phosphocarrier protein HPr / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
is similar to:
PaperBLAST

scrA / GB|AAN59464.1: PTS system, sucrose-specific, EIIBCA component; EC 2.7.1.69 from Streptococcus mutans

37% id,
22% cov

ptsG / GB|CAB13262.1: PTS system glucose-specific EIICBA component; EC 2.7.1.-; EC 2.7.1.69 from Bacillus subtilis

41% id,
18% cov

Pf1N1B4_1146: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
is similar to:
PaperBLAST

mtlA / GB|AAC76623.1: PTS system mannitol-specific EIICBA component; EC 2.7.1.-; EC 2.7.1.69 from Escherichia coli

36% id,
22% cov

Pf1N1B4_5532: hypothetical protein
is similar to:
PaperBLAST

Q8I406: 1-phosphatidylinositol 4-kinase (EC 2.7.1.67) from Plasmodium falciparum

25% id,
12% cov

PI51N_PLAF7 / Q8I239: Phosphatidylinositol 4-phosphate 5-kinase; EC 2.7.1.68 from Plasmodium falciparum

28% id,
4% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory