Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 6 curated entries in PaperBLAST's database that match '2.8.3.13'.
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_1815: L-carnitine dehydratase/bile acid-inducible protein F is similar to: | PaperBLAST |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 94% id, 100% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 88% id, 100% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 58% id, 95% cov |
| Pf1N1B4_5611: L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) is similar to: | PaperBLAST |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 38% id, 99% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 38% id, 99% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 35% id, 97% cov |
| Pf1N1B4_3018: L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) is similar to: | PaperBLAST |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 36% id, 97% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 34% id, 99% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 34% id, 99% cov |
| Pf1N1B4_3488: Alpha-methylacyl-CoA racemase (EC 5.1.99.4) is similar to: | PaperBLAST |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 35% id, 100% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 34% id, 100% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 35% id, 97% cov |
| Pf1N1B4_611: CoA transferase, CAIB/BAIF family is similar to: | PaperBLAST |
SUCHY_HUMAN / Q9HAC7: Succinate--hydroxymethylglutarate CoA-transferase; Dermal papilla-derived protein 13; SuccinylCoA:glutarate-CoA transferase; EC 2.8.3.13 from Homo sapiens | 29% id, 54% cov |
SUGCT / Q9HAC7: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Homo sapiens | 29% id, 53% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 30% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory