Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 31 curated entries in PaperBLAST's database that match '3.1.2.6' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_3109: S-formylglutathione hydrolase (EC 3.1.2.12)
is similar to:
PaperBLAST

YeiG / b2154: S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (EC 3.1.2.12; EC 3.1.2.6) from Escherichia coli
yeiG / P33018: S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (EC 3.1.2.12; EC 3.1.2.6) from Escherichia coli

60% id,
99% cov

Pf1N1B4_4596: Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
is similar to:
PaperBLAST

GLO2_ECOLI / P0AC84: Hydroxyacylglutathione hydrolase GloB; Glyoxalase II; Glx II; EC 3.1.2.6 from Escherichia coli
YafR / b0212: hydroxyacylglutathione hydrolase GloB (EC 3.1.2.6) from Escherichia coli
gloB / MB|P0AC84: hydroxyacylglutathione hydrolase; EC 3.1.2.6 from Escherichia coli
gloB / P0AC84: hydroxyacylglutathione hydrolase GloB (EC 3.1.2.6) from Escherichia coli

47% id,
100% cov

Q8YZ99: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Nostoc sp.

46% id,
100% cov

GLO2_SALTY / Q8ZRM2: Hydroxyacylglutathione hydrolase; Glyoxalase II; Glx II; EC 3.1.2.6 from Salmonella typhimurium
Q8ZRM2: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Salmonella enterica

46% id,
100% cov

More...

Pf1N1B4_2963: Hypothetical metal-binding enzyme, YcbL homolog
is similar to:
PaperBLAST

GLO22_ECOLI / P75849: Hydroxyacylglutathione hydrolase GloC; Accessory type II glyoxalase; Glyoxalase II 2; GlxII-2; EC 3.1.2.6 from Escherichia coli
GloC / b0927: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli
gloC / P75849: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli

41% id,
95% cov

A0A0D1GCF8: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Staphylococcus aureus

35% id,
90% cov

Pf1N1B4_4482: FIG146518: Zn-dependent hydrolases, including glyoxylases
is similar to:
PaperBLAST

GLO2C_ARATH / O24496: Hydroxyacylglutathione hydrolase cytoplasmic; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana

26% id,
78% cov

Pf1N1B4_3334: Metal-dependent hydrolases of the beta-lactamase superfamily I
is similar to:
PaperBLAST

A0A0D1GCF8: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Staphylococcus aureus

30% id,
43% cov

Pf1N1B4_529: SoxH protein, homolog
is similar to:
PaperBLAST

GLO22_ECOLI / P75849: Hydroxyacylglutathione hydrolase GloC; Accessory type II glyoxalase; Glyoxalase II 2; GlxII-2; EC 3.1.2.6 from Escherichia coli
GloC / b0927: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli
gloC / P75849: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli

46% id,
21% cov

GLO2N_ARATH / Q9SID3: Hydroxyacylglutathione hydrolase 2, mitochondrial; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana

31% id,
24% cov

GLO2M_ARATH / O24495: Hydroxyacylglutathione hydrolase 1, mitochondrial; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana

33% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory