Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 241 curated entries in PaperBLAST's database that match '3.2.1.26'.

These curated entries have 195 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_5116: Sucrose-6-phosphate hydrolase (EC 3.2.1.B3)
is similar to:
PaperBLAST

AAA24499.1: invertase (RafD) (EC 3.2.1.26)

46% id,
100% cov

CAA57219.1: invertase (CscA) (EC 3.2.1.26)

44% id,
100% cov

AAC33123.1: invertase (CscA) (EC 3.2.1.26)
AAP79503.1: sucrose hydrolase (CscA) (EC 3.2.1.26)

46% id,
96% cov

More...

Pf1N1B4_4677: Trehalose synthase (EC 5.4.99.16)
is similar to:
PaperBLAST

ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum

28% id,
55% cov

Pf1N1B4_835: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
is similar to:
PaperBLAST

ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum

33% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory