Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 52 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 43 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_2023: L-asparaginase (EC 3.5.1.1)
is similar to:
PaperBLAST

Pf1N1B4_2023: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

100% id,
100% cov

PfGW456L13_740: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

93% id,
100% cov

Pf6N2E2_4087: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

92% id,
100% cov

More...

Pf1N1B4_6037: L-asparaginase (EC 3.5.1.1)
is similar to:
PaperBLAST

P50286: asparaginase (EC 3.5.1.1) from Wolinella succinogenes

46% id,
99% cov

ASPG2_ECOLI / P00805: L-asparaginase 2; L-asparaginase II; L-ASNase II; L-asparagine amidohydrolase II; Colaspase; EC 3.5.1.1 from Escherichia coli
AnsB / b2957: L-asparaginase 2 (EC 3.5.1.38; EC 3.5.1.1) from Escherichia coli

48% id,
94% cov

C0KWF5: asparaginase (EC 3.5.1.1) from Escherichia coli

48% id,
94% cov

More...

Pf1N1B4_3785: FOG: Ankyrin repeat
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

32% id,
26% cov

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

24% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory