Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 36 curated entries in PaperBLAST's database that match '3.5.1.25'.

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_1985: Dihydroorotase (EC 3.5.2.3)
is similar to:
PaperBLAST

Ga0059261_1645: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Sphingomonas koreensis

23% id,
77% cov

Pf1N1B4_355: S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase
is similar to:
PaperBLAST

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

41% id,
18% cov

NAGA_ECO57 / P0AF19: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Escherichia coli
NAGA_ECOLI / P0AF18: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Escherichia coli
NagA / b0677: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli
AAG54999.1: EDL933_0745 (EC 3.5.1.25) from
AAC73771.1: N-acetylglucosamine 6-phosphate deacetylase (NagA;b0677) (EC 3.5.1.25) from
BAB34130.1: ECs0707 (EC 3.5.1.25) from
nagA / P0AF18: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli

36% id,
18% cov

AAN79225.1: c0752 (NagA) (EC 3.5.1.25) from

36% id,
18% cov

Pf1N1B4_4517: Dihydropyrimidinase (EC 3.5.2.2)
is similar to:
PaperBLAST

nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis

34% id,
17% cov

Pf1N1B4_3850: Guanine deaminase (EC 3.5.4.3)
is similar to:
PaperBLAST

nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis

33% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory