Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 6 curated entries in PaperBLAST's database that match '3.5.1.53'.

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_1662: N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4)
is similar to:
PaperBLAST

aguB / Q9I6J8: N-carbamoylputrascine amidohydrolase subunit (EC 3.5.1.53) from Pseudomonas aeruginosa

86% id,
100% cov

NILP1_ARATH / Q8VYF5: N-carbamoylputrescine amidase; Nitrilase-like protein 1; EC 3.5.1.53 from Arabidopsis thaliana
At2g27450 / Q8VYF5: At2g27450-monomer (EC 3.5.1.53) from Arabidopsis thaliana

63% id,
98% cov

AGUB_SOLLC / Q9XGI9: N-carbamoylputrescine amidase; EC 3.5.1.53 from Solanum lycopersicum

62% id,
97% cov

More...

Pf1N1B4_4326: N-carbamoylputrescine amidase (3.5.1.53)
is similar to:
PaperBLAST

aguB / Q9I6J8: N-carbamoylputrascine amidohydrolase subunit (EC 3.5.1.53) from Pseudomonas aeruginosa

56% id,
97% cov

NILP1_ARATH / Q8VYF5: N-carbamoylputrescine amidase; Nitrilase-like protein 1; EC 3.5.1.53 from Arabidopsis thaliana
At2g27450 / Q8VYF5: At2g27450-monomer (EC 3.5.1.53) from Arabidopsis thaliana

54% id,
97% cov

AGUB_SOLLC / Q9XGI9: N-carbamoylputrescine amidase; EC 3.5.1.53 from Solanum lycopersicum

54% id,
97% cov

More...

Pf1N1B4_2504: 5-aminopentanamidase (EC 3.5.1.30)
is similar to:
PaperBLAST

AGUB_SOLLC / Q9XGI9: N-carbamoylputrescine amidase; EC 3.5.1.53 from Solanum lycopersicum

31% id,
90% cov

aguB / Q9I6J8: N-carbamoylputrascine amidohydrolase subunit (EC 3.5.1.53) from Pseudomonas aeruginosa

29% id,
92% cov

aguB / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC 3.5.1.53) from Campylobacter jejuni

27% id,
89% cov

Pf1N1B4_4710: Plant-induced nitrilase (EC 3.5.5.1), hydrolyses beta-cyano-L-alanine
is similar to:
PaperBLAST

aguB / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC 3.5.1.53) from Campylobacter jejuni

26% id,
66% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory