Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 14 curated entries in PaperBLAST's database that match '3.5.1.68'.

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_1578: N-formylglutamate deformylase (EC 3.5.1.68)
is similar to:
PaperBLAST

Pf1N1B4_1578: N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens

100% id,
100% cov

AO353_12285: N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens

93% id,
100% cov

PfGW456L13_316: N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens

93% id,
100% cov

More...

Pf1N1B4_5854: FIG00960144: hypothetical protein
is similar to:
PaperBLAST

AO353_12285: N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens

33% id,
47% cov

AO356_09590: N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens

32% id,
47% cov

PfGW456L13_316: N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens

32% id,
47% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory