Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 182 curated entries in PaperBLAST's database that match '3.5.1.9'.

These curated entries have 136 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4353: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94)
is similar to:
PaperBLAST

AO353_29305: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

95% id,
100% cov

Pf6N2E2_4510: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

74% id,
98% cov

AO356_13140: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

73% id,
98% cov

More...

Pf1N1B4_3447: Succinylglutamate desuccinylase (EC 3.5.1.96)
is similar to:
PaperBLAST

PfGW456L13_1977: Succinylglutamate desuccinylase (EC 3.5.1.96) from Pseudomonas fluorescens

93% id,
100% cov

O50177: succinylglutamate desuccinylase (EC 3.5.1.96) from Pseudomonas aeruginosa

73% id,
99% cov

BPHYT_RS07720: Succinylglutamate desuccinylase (EC 3.5.1.96) from Burkholderia phytofirmans

41% id,
98% cov

More...

Pf1N1B4_2255: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94)
is similar to:
PaperBLAST

Pf6N2E2_4510: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

83% id,
100% cov

AO356_13140: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

83% id,
100% cov

AO353_29305: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

71% id,
100% cov

More...

Pf1N1B4_4702: Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching
is similar to:
PaperBLAST

Q4ZV08: acyl-homoserine-lactone acylase (EC 3.5.1.97) from Pseudomonas syringae

69% id,
100% cov

PVDQ_PSEAE / Q9I194: Acyl-homoserine lactone acylase PvdQ; AHL acylase PvdQ; Acyl-HSL acylase PvdQ; EC 3.5.1.97 from Pseudomonas aeruginosa
Q9I194: acyl-homoserine-lactone acylase (EC 3.5.1.97) from Pseudomonas aeruginosa

56% id,
99% cov

Q8EIC5: acyl-homoserine-lactone acylase (EC 3.5.1.97) from Shewanella oneidensis

33% id,
93% cov

More...

Pf1N1B4_3182: Penicillin acylase (EC 3.5.1.11)
is similar to:
PaperBLAST

QUIP_PSEAE / Q9I4U2: Acyl-homoserine lactone acylase QuiP; AHL acylase QuiP; Acyl-HSL acylase QuiP; Quorum signal utilization and inactivation protein; EC 3.5.1.97 from Pseudomonas aeruginosa

66% id,
100% cov

P15558: glutaryl-7-aminocephalosporanic-acid acylase (EC 3.5.1.93) from Pseudomonas sp.

29% id,
95% cov

Pf1N1B4_4081: Gamma-glutamyltranspeptidase (EC 2.3.2.2)
is similar to:
PaperBLAST

PAC1_PSES3 / P15557: Acylase ACY 1 proenzyme; EC 3.5.1.93; EC 2.3.2.2; EC 3.4.19.13 from Pseudomonas sp.
P15557: glutaryl-7-aminocephalosporanic-acid acylase (EC 3.5.1.93) from Pseudomonas sp.

39% id,
94% cov

Pf1N1B4_2898: Gamma-glutamyltranspeptidase (EC 2.3.2.2)
is similar to:
PaperBLAST

PAC1_PSES3 / P15557: Acylase ACY 1 proenzyme; EC 3.5.1.93; EC 2.3.2.2; EC 3.4.19.13 from Pseudomonas sp.
P15557: glutaryl-7-aminocephalosporanic-acid acylase (EC 3.5.1.93) from Pseudomonas sp.

33% id,
97% cov

Pf1N1B4_2264: Penicillin acylase II (EC 3.5.1.11)
is similar to:
PaperBLAST

QUIP_PSEAE / Q9I4U2: Acyl-homoserine lactone acylase QuiP; AHL acylase QuiP; Acyl-HSL acylase QuiP; Quorum signal utilization and inactivation protein; EC 3.5.1.97 from Pseudomonas aeruginosa

28% id,
96% cov

PVDQ_PSEAE / Q9I194: Acyl-homoserine lactone acylase PvdQ; AHL acylase PvdQ; Acyl-HSL acylase PvdQ; EC 3.5.1.97 from Pseudomonas aeruginosa
Q9I194: acyl-homoserine-lactone acylase (EC 3.5.1.97) from Pseudomonas aeruginosa

22% id,
99% cov

P15558: glutaryl-7-aminocephalosporanic-acid acylase (EC 3.5.1.93) from Pseudomonas sp.

28% id,
32% cov

Pf1N1B4_2020: Deacetylases, including yeast histone deacetylase and acetoin utilization protein
is similar to:
PaperBLAST

Q70I53: amidase (EC 3.5.1.4); histone deacetylase (EC 3.5.1.98) from Alcaligenes sp.

34% id,
72% cov

HDA8_ARATH / Q94EJ2: Histone deacetylase 8; EC 3.5.1.98 from Arabidopsis thaliana

36% id,
62% cov

Q2QWU2: histone deacetylase (EC 3.5.1.98) from Oryza sativa

31% id,
55% cov

More...

Pf1N1B4_2738: Deacetylases, including yeast histone deacetylase and acetoin utilization protein
is similar to:
PaperBLAST

B2GUW3: histone deacetylase (EC 3.5.1.98) from Rattus norvegicus

28% id,
84% cov

O67135: histone deacetylase (EC 3.5.1.98) from Aquifex aeolicus

29% id,
80% cov

HDA11_HUMAN / Q96DB2: Histone deacetylase 11; HD11; EC 3.5.1.98 from Homo sapiens
Q96DB2: histone deacetylase (EC 3.5.1.98) from Homo sapiens

27% id,
84% cov

More...

Pf1N1B4_176: Acetylpolyamine aminohydrolase
is similar to:
PaperBLAST

Q70I53: amidase (EC 3.5.1.4); histone deacetylase (EC 3.5.1.98) from Alcaligenes sp.

40% id,
59% cov

HDA8_ARATH / Q94EJ2: Histone deacetylase 8; EC 3.5.1.98 from Arabidopsis thaliana

37% id,
59% cov

HDAC8_MOUSE / Q8VH37: Histone deacetylase 8; HD8; Protein deacetylase HDAC8; Protein decrotonylase HDAC8; EC 3.5.1.98; EC 3.5.1.- from Mus musculus

28% id,
74% cov

More...

Pf1N1B4_4978: Deacetylases, including yeast histone deacetylase and acetoin utilization protein
is similar to:
PaperBLAST

Q70I53: amidase (EC 3.5.1.4); histone deacetylase (EC 3.5.1.98) from Alcaligenes sp.

35% id,
65% cov

HDA8_ARATH / Q94EJ2: Histone deacetylase 8; EC 3.5.1.98 from Arabidopsis thaliana

38% id,
58% cov

CLR6_SCHPO / O59702: Histone deacetylase clr6; Cryptic loci regulator 6; EC 3.5.1.98 from Schizosaccharomyces pombe

27% id,
69% cov

More...

Pf1N1B4_4208: organophosphate pesticide hydrolase
is similar to:
PaperBLAST

D8VDY4: acyl-homoserine-lactone acylase (EC 3.5.1.97) from Bacillus thuringiensis

26% id,
82% cov

Pf1N1B4_1101: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)
is similar to:
PaperBLAST

FAAH_ARATH / Q7XJJ7: Fatty acid amide hydrolase; AtFAAH; N-acylethanolamine amidohydrolase; EC 3.5.1.99 from Arabidopsis thaliana
Q7XJJ7: fatty acid amide hydrolase (EC 3.5.1.99) from Arabidopsis thaliana

30% id,
69% cov

A0A077JIE7: acyl-homoserine-lactone acylase (EC 3.5.1.97) from Acinetobacter sp.

35% id,
46% cov

FAAH2_HUMAN / Q6GMR7: Fatty-acid amide hydrolase 2; Amidase domain-containing protein; Anandamide amidohydrolase 2; Oleamide hydrolase 2; EC 3.5.1.99 from Homo sapiens
FAAH2 / Q6GMR7: fatty-acid amide hydrolase 2 (EC 3.5.1.99; EC 3.5.1.60) from Homo sapiens
Q6GMR7: amidase (EC 3.5.1.4); fatty acid amide hydrolase (EC 3.5.1.99) from Homo sapiens

33% id,
45% cov

More...

Pf1N1B4_3300: Allophanate hydrolase (EC 3.5.1.54)
is similar to:
PaperBLAST

FAAH4_CAEEL / Q9U217: Monoglyceride lipase faah-4; Fatty acid amide hydrolase 4; EC 3.1.1.23; EC 3.5.1.99 from Caenorhabditis elegans

25% id,
70% cov

A0A077JIE7: acyl-homoserine-lactone acylase (EC 3.5.1.97) from Acinetobacter sp.

33% id,
40% cov

FAAH_ARATH / Q7XJJ7: Fatty acid amide hydrolase; AtFAAH; N-acylethanolamine amidohydrolase; EC 3.5.1.99 from Arabidopsis thaliana
Q7XJJ7: fatty acid amide hydrolase (EC 3.5.1.99) from Arabidopsis thaliana

29% id,
42% cov

More...

Pf1N1B4_4165: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)
is similar to:
PaperBLAST

FAAH1_HUMAN / O00519: Fatty-acid amide hydrolase 1; Anandamide amidohydrolase 1; Fatty acid ester hydrolase; Oleamide hydrolase 1; EC 3.5.1.99; EC 3.1.1.- from Homo sapiens
FAAH / O00519: fatty acid amide hydrolase 1 monomer (EC 3.5.1.60; EC 3.5.1.99) from Homo sapiens
O00519: amidase (EC 3.5.1.4); fatty acid amide hydrolase (EC 3.5.1.99) from Homo sapiens

32% id,
49% cov

FAAH1_PIG / Q9TUI8: Fatty-acid amide hydrolase 1; Anandamide amidase; Anandamide amidohydrolase 1; Fatty acid ester hydrolase; Oleamide hydrolase 1; EC 3.5.1.99; EC 3.1.1.- from Sus scrofa

31% id,
48% cov

FAAH1_RAT / P97612: Fatty-acid amide hydrolase 1; Anandamide amidase; Anandamide amidohydrolase 1; Fatty acid ester hydrolase; Oleamide hydrolase 1; EC 3.5.1.99; EC 3.1.1.- from Rattus norvegicus
P97612: amidase (EC 3.5.1.4); fatty acid amide hydrolase (EC 3.5.1.99) from Rattus norvegicus

30% id,
49% cov

More...

Pf1N1B4_5909: Exoenzymes regulatory protein AepA precursor
is similar to:
PaperBLAST

NFDA_ARTPS / Q68AP4: N-substituted formamide deformylase; EC 3.5.1.91 from Arthrobacter pascens
nfdA / Q68AP4: N-substituted formamide deformylase subunit (EC 3.5.1.91) from Arthrobacter pascens
Q68AP4: N-substituted formamide deformylase (EC 3.5.1.91) from Arthrobacter pascens

30% id,
42% cov

Pf1N1B4_5671: Exoenzymes regulatory protein AepA precursor
is similar to:
PaperBLAST

NFDA_ARTPS / Q68AP4: N-substituted formamide deformylase; EC 3.5.1.91 from Arthrobacter pascens
nfdA / Q68AP4: N-substituted formamide deformylase subunit (EC 3.5.1.91) from Arthrobacter pascens
Q68AP4: N-substituted formamide deformylase (EC 3.5.1.91) from Arthrobacter pascens

33% id,
36% cov

Pf1N1B4_2192: Twin-arginine translocation protein TatB
is similar to:
PaperBLAST

Q7SEB0: histone deacetylase (EC 3.5.1.98) from Neurospora crassa

27% id,
43% cov

Pf1N1B4_145: Esterase/lipase
is similar to:
PaperBLAST

A0A287B5F1: arylformamidase (EC 3.5.1.9) from Sus scrofa

31% id,
33% cov

Pf1N1B4_1559: Polyhydroxyalkanoate granule-associated protein PhaF
is similar to:
PaperBLAST

Q7SEB0: histone deacetylase (EC 3.5.1.98) from Neurospora crassa

30% id,
29% cov

Pf1N1B4_4517: Dihydropyrimidinase (EC 3.5.2.2)
is similar to:
PaperBLAST

NFDA_ARTPS / Q68AP4: N-substituted formamide deformylase; EC 3.5.1.91 from Arthrobacter pascens
nfdA / Q68AP4: N-substituted formamide deformylase subunit (EC 3.5.1.91) from Arthrobacter pascens
Q68AP4: N-substituted formamide deformylase (EC 3.5.1.91) from Arthrobacter pascens

38% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

506625-507194 (frame -1) on unitig_3|quiver|pilon
is similar to:
PaperBLAST

HDA1_CANAL / Q5A960: Histone deacetylase HDA1; EC 3.5.1.98 from Candida albicans
Also see hits to annotated proteins above

50% id,
4% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory