Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_1579: Imidazolonepropionase (EC 3.5.2.7)
is similar to:
PaperBLAST

Pf1N1B4_1579: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

100% id,
100% cov

PfGW456L13_317: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

95% id,
100% cov

AO353_12280: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

92% id,
100% cov

More...

Pf1N1B4_1249: Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3)
is similar to:
PaperBLAST

PGA1_c36350: Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens

22% id,
98% cov

Pf1N1B4_355: S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase
is similar to:
PaperBLAST

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

27% id,
58% cov

hutI / O31200: imidazolonepropionase (EC 3.5.2.7) from Pseudomonas putida

24% id,
53% cov

AO353_12280: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

26% id,
43% cov

More...

Pf1N1B4_4090: Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster
is similar to:
PaperBLAST

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

28% id,
37% cov

Pf1N1B4_5671: Exoenzymes regulatory protein AepA precursor
is similar to:
PaperBLAST

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

34% id,
24% cov

SM_b21166: Imidazolonepropionase (EC 3.5.2.7) from Sinorhizobium meliloti

31% id,
20% cov

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

32% id,
16% cov

Pf1N1B4_5909: Exoenzymes regulatory protein AepA precursor
is similar to:
PaperBLAST

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

31% id,
24% cov

HUTI_AGRFC / Q8U8Z6: Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum
Q8U8Z6: imidazolonepropionase (EC 3.5.2.7) from Agrobacterium tumefaciens

29% id,
22% cov

SM_b21166: Imidazolonepropionase (EC 3.5.2.7) from Sinorhizobium meliloti

32% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory