Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 4 curated entries in PaperBLAST's database that match '3.7.1.26' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_5706: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

32% id,
94% cov

Pf1N1B4_2275: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

lra6 / Q1NEI7: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

33% id,
72% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

35% id,
67% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

35% id,
67% cov

Pf1N1B4_1024: Fumarylacetoacetase (EC 3.7.1.2)
is similar to:
PaperBLAST

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

33% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory