Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 47 curated entries in PaperBLAST's database that match '4.1.1.17' as complete word(s).
These curated entries have 35 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_4600: Lysine decarboxylase, inducible (EC 4.1.1.18) is similar to: | PaperBLAST |
A4Q8H0: ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens | 33% id, 98% cov |
P43099: ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri | 35% id, 92% cov |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 35% id, 91% cov |
| Pf1N1B4_1136: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) is similar to: | PaperBLAST |
DCOR_CAEEL / P41931: Ornithine decarboxylase; ODC; EC 4.1.1.17 from Caenorhabditis elegans | 32% id, 90% cov |
Q58P26: ornithine decarboxylase (EC 4.1.1.17) from Entamoeba histolytica | 30% id, 94% cov |
DCOR1_XENLA / P27120: Ornithine decarboxylase 1; ODC 1; xODC1; EC 4.1.1.17 from Xenopus laevis | 31% id, 86% cov |
| Pf1N1B4_2174: Diaminopimelate decarboxylase (EC 4.1.1.20) is similar to: | PaperBLAST |
G4XUJ8: ornithine decarboxylase (EC 4.1.1.17) from Erythroxylum coca | 28% id, 80% cov |
DCOR_CAEEL / P41931: Ornithine decarboxylase; ODC; EC 4.1.1.17 from Caenorhabditis elegans | 25% id, 84% cov |
AN3846: ornithine decarboxylase; EC 4.1.1.17 from Emericella nidulans | 26% id, 82% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory