Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 26 curated entries in PaperBLAST's database that match '4.1.1.20'.
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_2174: Diaminopimelate decarboxylase (EC 4.1.1.20) is similar to: | PaperBLAST |
Q9KVL7: diaminopimelate decarboxylase (EC 4.1.1.20) from Vibrio cholerae | 66% id, 100% cov |
Ga0059261_2051: diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingomonas koreensis | 49% id, 99% cov |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 43% id, 98% cov |
| Pf1N1B4_1136: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) is similar to: | PaperBLAST |
P56129: diaminopimelate decarboxylase (EC 4.1.1.20) from Helicobacter pylori | 30% id, 89% cov |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 30% id, 89% cov |
DCDA_METJA / Q58497: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Methanocaldococcus jannaschii | 30% id, 88% cov |
| Pf1N1B4_1296: Biosynthetic arginine decarboxylase (EC 4.1.1.19) is similar to: | PaperBLAST |
DCDA_METJA / Q58497: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Methanocaldococcus jannaschii | 24% id, 74% cov |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 26% id, 64% cov |
Q9KVL7: diaminopimelate decarboxylase (EC 4.1.1.20) from Vibrio cholerae | 26% id, 61% cov |
| Pf1N1B4_3451: Aspartokinase (EC 2.7.2.4) is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 26% id, 46% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory