Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 63 curated entries in PaperBLAST's database that match '4.1.2.5'.
These curated entries have 33 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_2451: Low-specificity L-threonine aldolase (EC 4.1.2.48) is similar to: | PaperBLAST |
PfGW456L13_1114: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas fluorescens | 97% id, 100% cov |
AO353_07670: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas fluorescens | 95% id, 100% cov |
Q88R13: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas putida | 86% id, 100% cov |
| Pf1N1B4_110: Queuosine biosynthesis QueD, PTPS-I is similar to: | PaperBLAST |
QUED_ECOLI / P65870: 6-carboxy-5,6,7,8-tetrahydropterin synthase; CPH4 synthase; Queuosine biosynthesis protein QueD; EC 4.1.2.50 from Escherichia coli | 75% id, 96% cov |
QUED_BACSU / O31676: 6-carboxy-5,6,7,8-tetrahydropterin synthase; CPH4 synthase; Queuosine biosynthesis protein QueD; EC 4.1.2.50 from Bacillus subtilis | 32% id, 84% cov |
| Pf1N1B4_3449: Low-specificity L-threonine aldolase (EC 4.1.2.48) is similar to: | PaperBLAST |
LtaA / b0870: low-specificity L-threonine aldolase (EC 4.1.2.48; EC 4.1.2.5; EC 4.1.2.26; EC 4.1.2.49) from Escherichia coli | 57% id, 99% cov |
Q9X266: L-threonine aldolase (EC 4.1.2.5) from Thermotoga maritima | 48% id, 98% cov |
GLY1 / GB|AAA72430.1: threonine aldolase; EC 4.1.2.5 from Saccharomyces cerevisiae | 40% id, 86% cov |
| Pf1N1B4_5694: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.n4) is similar to: | PaperBLAST |
HPCH_ECOLX / Q47098: 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; HHED aldolase; 4-hydroxy-2-ketoheptane-1,7-dioate aldolase; HKHD aldolase; EC 4.1.2.52 from Escherichia coli | 53% id, 99% cov |
RHMA_ECOLI / P76469: 2-keto-3-deoxy-L-rhamnonate aldolase; KDR aldolase; 2-dehydro-3-deoxyrhamnonate aldolase; 2-keto-3-deoxy acid sugar aldolase; EC 4.1.2.53 from Escherichia coli | 51% id, 94% cov |
KDSGA_PSEPU / P0DOV8: 2-dehydro-3,6-dideoxy-6-sulfogluconate aldolase; 2-keto-3,6-dideoxy-6-sulfogluconate aldolase; KDSG aldolase; EC 4.1.2.58 from Pseudomonas putida | 37% id, 100% cov |
| Pf1N1B4_399: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) is similar to: | PaperBLAST |
YidU / b4477: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC 4.1.2.55; EC 4.1.2.21) from Escherichia coli | 47% id, 94% cov |
kdgA / P38448: 2-dehydro-3-deoxy-D-gluconate-6-phosphate aldolase (EC 4.1.2.55) from Dickeya dadantii | 32% id, 77% cov |
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli | 31% id, 77% cov |
| Pf1N1B4_587: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is similar to: | PaperBLAST |
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli | 46% id, 94% cov |
kdgA / P38448: 2-dehydro-3-deoxy-D-gluconate-6-phosphate aldolase (EC 4.1.2.55) from Dickeya dadantii | 45% id, 94% cov |
TM0066 / Q9WXS1: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16; EC 4.1.2.55) from Thermotoga maritima | 29% id, 99% cov |
| Pf1N1B4_2402: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) is similar to: | PaperBLAST |
SQIA_ALKUR / A0A2P6MHY1: Sulfofructosephosphate aldolase; SFP aldolase; EC 4.1.2.57 from Alkalicoccus urumqiensis | 34% id, 99% cov |
| Pf1N1B4_5813: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) is similar to: | PaperBLAST |
YAGE_ECOLI / P75682: Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE; KDG aldolase YagE; Putative 2-dehydro-3-deoxy-D-pentonate aldolase YagE; EC 4.1.2.51; EC 4.1.2.28 from Escherichia coli | 32% id, 97% cov |
KDGA_PICTO / Q6KZI8: 2-dehydro-3-deoxy-D-gluconate/2-dehydro-3-deoxy-phosphogluconate aldolase; 2-dehydro-3-deoxy-galactonate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.14; EC 4.1.2.51; EC 4.1.2.-; EC 4.1.2.21 from Picrophilus torridus | 23% id, 98% cov |
LGA1_HYPJE / A6Y9S5: L-threo-3-deoxy-hexylosonate aldolase; L-threo-3-deoxy-hexulosonate aldolase; EC 4.1.2.54 from Hypocrea jecorina | 31% id, 74% cov |
| Pf1N1B4_3332: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) is similar to: | PaperBLAST |
YAGE_ECOLI / P75682: Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE; KDG aldolase YagE; Putative 2-dehydro-3-deoxy-D-pentonate aldolase YagE; EC 4.1.2.51; EC 4.1.2.28 from Escherichia coli | 32% id, 80% cov |
KDGA_PICTO / Q6KZI8: 2-dehydro-3-deoxy-D-gluconate/2-dehydro-3-deoxy-phosphogluconate aldolase; 2-dehydro-3-deoxy-galactonate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.14; EC 4.1.2.51; EC 4.1.2.-; EC 4.1.2.21 from Picrophilus torridus | 29% id, 75% cov |
| Pf1N1B4_5976: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) is similar to: | PaperBLAST |
YAGE_ECOLI / P75682: Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE; KDG aldolase YagE; Putative 2-dehydro-3-deoxy-D-pentonate aldolase YagE; EC 4.1.2.51; EC 4.1.2.28 from Escherichia coli | 26% id, 99% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 11 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory