Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 22 curated entries in PaperBLAST's database that match '4.2.1.22' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_4890: Cystathionine gamma-lyase (EC 4.4.1.1) is similar to: | PaperBLAST |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 52% id, 93% cov |
| Pf1N1B4_3374: Cysteine synthase (EC 2.5.1.47) is similar to: | PaperBLAST |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 40% id, 97% cov |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 39% id, 97% cov |
Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis | 43% id, 67% cov |
| Pf1N1B4_4889: Cystathionine beta-synthase (EC 4.2.1.22) is similar to: | PaperBLAST |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 39% id, 98% cov |
Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis | 39% id, 97% cov |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 37% id, 97% cov |
| Pf1N1B4_3506: Cysteine synthase B (EC 2.5.1.47) is similar to: | PaperBLAST |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 36% id, 99% cov |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 36% id, 98% cov |
Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis | 40% id, 65% cov |
| Pf1N1B4_4430: Cystathionine beta-lyase (EC 4.4.1.8) is similar to: | PaperBLAST |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 34% id, 93% cov |
| Pf1N1B4_4758: Threonine dehydratase biosynthetic (EC 4.3.1.19) is similar to: | PaperBLAST |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 29% id, 82% cov |
| Pf1N1B4_2280: Threonine dehydratase biosynthetic (EC 4.3.1.19) is similar to: | PaperBLAST |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 27% id, 68% cov |
CBS / A0A563XPB1: cystathionine β-synthase (EC 4.2.1.22) from Gallus gallus | 31% id, 39% cov |
CBS_HUMAN / P35520: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Homo sapiens | 31% id, 38% cov |
| Pf1N1B4_5040: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 29% id, 59% cov |
| Pf1N1B4_88: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 29% id, 56% cov |
| Pf1N1B4_3203: Cysteine synthase (EC 2.5.1.47) is similar to: | PaperBLAST |
CBS_RAT / P32232: Cystathionine beta-synthase; Beta-thionase; Hemoprotein H-450; Serine sulfhydrase; EC 4.2.1.22 from Rattus norvegicus | 30% id, 53% cov |
| Pf1N1B4_2709: Magnesium and cobalt efflux protein CorC is similar to: | PaperBLAST |
Q3TWN3: cystathionine beta-synthase (EC 4.2.1.22) from Mus musculus | 30% id, 21% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 11 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 967996-969540 (frame -3) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 26% id, 97% cov |
| 226487-226909 (frame +2) on unitig_3|quiver|pilon is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 24% id, 60% cov |
Lawrence Berkeley National Laboratory