Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 14 curated entries in PaperBLAST's database that match '4.2.1.25'.
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_4621: L-arabonate dehydratase (EC 4.2.1.25) is similar to: | PaperBLAST |
PS417_11000: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas simiae | 98% id, 100% cov |
AO356_24585: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 98% id, 100% cov |
PfGW456L13_3320: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 98% id, 100% cov |
| Pf1N1B4_398: Galactonate dehydratase (EC 4.2.1.6) is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 36% id, 97% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 31% id, 89% cov |
| Pf1N1B4_2303: Dihydroxy-acid dehydratase (EC 4.2.1.9) is similar to: | PaperBLAST |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 30% id, 92% cov |
SM_b20890: L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti | 33% id, 61% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 32% id, 61% cov |
| Pf1N1B4_601: Phosphogluconate dehydratase (EC 4.2.1.12) is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 31% id, 84% cov |
Shewana3_2070: L-arabonate dehydratase (EC 4.2.1.25) from Shewanella sp. | 29% id, 88% cov |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 30% id, 84% cov |
| Pf1N1B4_3383: Mandelate racemase (EC 5.1.2.2) is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 28% id, 88% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 27% id, 84% cov |
| Pf1N1B4_5805: Muconate cycloisomerase (EC 5.5.1.1) is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 26% id, 88% cov |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 23% id, 87% cov |
| Pf1N1B4_5693: Gluconate dehydratase (EC 4.2.1.39) is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 26% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory