Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 5 curated entries in PaperBLAST's database that match '4.2.1.83' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
Pf1N1B4_4202: 4-oxalmesaconate hydratase (EC 4.2.1.83) is similar to: | PaperBLAST |
GALB_PSEPK / Q88JX8: 4-oxalmesaconate hydratase; OMA hydratase; Gallate degradation protein B; EC 4.2.1.83 from Pseudomonas putida | 90% id, 93% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
4654308-4655129 (frame +3) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
GALB_PSEPK / Q88JX8: 4-oxalmesaconate hydratase; OMA hydratase; Gallate degradation protein B; EC 4.2.1.83 from Pseudomonas putida | 87% id, 97% cov |
Lawrence Berkeley National Laboratory