Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 16 curated entries in PaperBLAST's database that match '4.2.1.9' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_2303: Dihydroxy-acid dehydratase (EC 4.2.1.9) is similar to:	PaperBLAST
ILVD_RHIJ3 / Q1MIB2: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Rhizobium johnstonii	76% id, 99% cov
ILVD_ECOLI / P05791: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Escherichia coli IlvD / b3771: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli ilvD / P05791: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli	75% id, 100% cov
ILVD_CAUVC / P55186: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Caulobacter vibrioides	72% id, 100% cov
Q8NQZ9: dihydroxy-acid dehydratase (EC 4.2.1.9) from Corynebacterium glutamicum	65% id, 100% cov
ILVD_ARATH / Q9LIR4: Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana Q9LIR4: dihydroxy-acid dehydratase (EC 4.2.1.9) from Arabidopsis thaliana	36% id, 91% cov
ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus	43% id, 67% cov
ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis	40% id, 62% cov
Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus	39% id, 64% cov
ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator	36% id, 65% cov
ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae	38% id, 60% cov
A0A481UJA7: dihydroxy-acid dehydratase (EC 4.2.1.9) from Hevea brasiliensis	36% id, 57% cov
ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus	35% id, 58% cov
ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus	37% id, 53% cov
ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator	45% id, 38% cov
ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae	43% id, 36% cov
ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis	44% id, 34% cov
Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus	43% id, 34% cov
A0A481UJA7: dihydroxy-acid dehydratase (EC 4.2.1.9) from Hevea brasiliensis	44% id, 31% cov
ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus	39% id, 35% cov
More...

Pf1N1B4_4621: L-arabonate dehydratase (EC 4.2.1.25) is similar to:	PaperBLAST
ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus	39% id, 95% cov
ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis	39% id, 94% cov
Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus	35% id, 96% cov
ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator	36% id, 89% cov
A0A481UJA7: dihydroxy-acid dehydratase (EC 4.2.1.9) from Hevea brasiliensis	35% id, 86% cov
ILVD_ARATH / Q9LIR4: Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana Q9LIR4: dihydroxy-acid dehydratase (EC 4.2.1.9) from Arabidopsis thaliana	34% id, 89% cov
ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus	33% id, 90% cov
ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae	31% id, 94% cov
ILVD_RHIJ3 / Q1MIB2: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Rhizobium johnstonii	30% id, 63% cov
ILVD_ECOLI / P05791: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Escherichia coli IlvD / b3771: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli ilvD / P05791: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli	30% id, 61% cov
ILVD_CAUVC / P55186: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Caulobacter vibrioides	32% id, 57% cov
Q8NQZ9: dihydroxy-acid dehydratase (EC 4.2.1.9) from Corynebacterium glutamicum	31% id, 57% cov
Q8NQZ9: dihydroxy-acid dehydratase (EC 4.2.1.9) from Corynebacterium glutamicum	33% id, 32% cov
ILVD_ECOLI / P05791: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Escherichia coli IlvD / b3771: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli ilvD / P05791: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli	37% id, 26% cov
More...

Pf1N1B4_601: Phosphogluconate dehydratase (EC 4.2.1.12) is similar to:	PaperBLAST
ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus	32% id, 99% cov
ILVD_ECOLI / P05791: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Escherichia coli IlvD / b3771: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli ilvD / P05791: dihydroxy-acid dehydratase (EC 4.2.1.9) from Escherichia coli	30% id, 99% cov
ILVD_RHIJ3 / Q1MIB2: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Rhizobium johnstonii	31% id, 93% cov
ILVD_CAUVC / P55186: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Caulobacter vibrioides	30% id, 94% cov
ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator	33% id, 86% cov
Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus	32% id, 83% cov
ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis	30% id, 87% cov
ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus	29% id, 90% cov
ILVD_ARATH / Q9LIR4: Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana Q9LIR4: dihydroxy-acid dehydratase (EC 4.2.1.9) from Arabidopsis thaliana	31% id, 83% cov
A0A481UJA7: dihydroxy-acid dehydratase (EC 4.2.1.9) from Hevea brasiliensis	31% id, 82% cov
ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae	31% id, 79% cov
Q8NQZ9: dihydroxy-acid dehydratase (EC 4.2.1.9) from Corynebacterium glutamicum	29% id, 58% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory