Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 590 curated entries in PaperBLAST's database that match '4.2.3.1'.
These curated entries have 408 distinct sequences.
Running ublast with E ≤ 0.01
Found 14 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
Pf1N1B4_3014: Threonine synthase (EC 4.2.3.1) is similar to: | PaperBLAST |
Q8YFS0: threonine synthase (EC 4.2.3.1) from Brucella melitensis | 58% id, 100% cov |
Q2SWH9: threonine synthase (EC 4.2.3.1) from Burkholderia thailandensis | 44% id, 99% cov |
THRC_CORGL / P23669: Threonine synthase; TS; EC 4.2.3.1 from Corynebacterium glutamicum | 44% id, 98% cov |
Pf1N1B4_1663: 4-aminobutyrate aminotransferase (EC 2.6.1.19) is similar to: | PaperBLAST |
AT2L2_HUMAN / Q8IUZ5: 5-phosphohydroxy-L-lysine phospho-lyase; Alanine--glyoxylate aminotransferase 2-like 2; EC 4.2.3.134 from Homo sapiens | 39% id, 97% cov |
Pf1N1B4_1537: 3-dehydroquinate synthase (EC 4.2.3.4) is similar to: | PaperBLAST |
EVS_ACTMD / C6WFL3: 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Actinosynnema mirum | 36% id, 92% cov |
EVS_STIAD / Q08VU0: 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Stigmatella aurantiaca | 36% id, 86% cov |
DOIS_STRSD / Q2MF16: 2-deoxy-scyllo-inosose synthase; DOI synthase; DOIS; EC 4.2.3.124 from Streptoalloteichus tenebrarius | 34% id, 91% cov |
Pf1N1B4_110: Queuosine biosynthesis QueD, PTPS-I is similar to: | PaperBLAST |
PTPS_MOUSE / Q9R1Z7: 6-pyruvoyl tetrahydrobiopterin synthase; PTP synthase; PTPS; EC 4.2.3.12 from Mus musculus | 34% id, 88% cov |
P27213: 6-pyruvoyltetrahydropterin synthase (EC 4.2.3.12) from Rattus norvegicus | 33% id, 88% cov |
PTPS_HUMAN / Q03393: 6-pyruvoyl tetrahydrobiopterin synthase; PTP synthase; PTPS; EC 4.2.3.12 from Homo sapiens | 28% id, 92% cov |
Pf1N1B4_4910: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) is similar to: | PaperBLAST |
AT2L2_HUMAN / Q8IUZ5: 5-phosphohydroxy-L-lysine phospho-lyase; Alanine--glyoxylate aminotransferase 2-like 2; EC 4.2.3.134 from Homo sapiens | 32% id, 90% cov |
Pf1N1B4_205: Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76) is similar to: | PaperBLAST |
AT2L2_HUMAN / Q8IUZ5: 5-phosphohydroxy-L-lysine phospho-lyase; Alanine--glyoxylate aminotransferase 2-like 2; EC 4.2.3.134 from Homo sapiens | 29% id, 94% cov |
Pf1N1B4_4257: L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17) @ Threonine dehydratase biosynthetic (EC 4.3.1.19) is similar to: | PaperBLAST |
P83823: threonine synthase (EC 4.2.3.1) from Thermus thermophilus | 28% id, 93% cov |
THRC_MYCTU / P9WG59: Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis | 28% id, 82% cov |
O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus | 29% id, 76% cov |
Pf1N1B4_4758: Threonine dehydratase biosynthetic (EC 4.3.1.19) is similar to: | PaperBLAST |
THRC_MYCTU / P9WG59: Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis | 29% id, 84% cov |
Pf1N1B4_1733: 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) is similar to: | PaperBLAST |
AT2L2_HUMAN / Q8IUZ5: 5-phosphohydroxy-L-lysine phospho-lyase; Alanine--glyoxylate aminotransferase 2-like 2; EC 4.2.3.134 from Homo sapiens | 28% id, 86% cov |
Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) is similar to: | PaperBLAST |
AT2L2_HUMAN / Q8IUZ5: 5-phosphohydroxy-L-lysine phospho-lyase; Alanine--glyoxylate aminotransferase 2-like 2; EC 4.2.3.134 from Homo sapiens | 27% id, 88% cov |
Pf1N1B4_2257: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) is similar to: | PaperBLAST |
AT2L2_HUMAN / Q8IUZ5: 5-phosphohydroxy-L-lysine phospho-lyase; Alanine--glyoxylate aminotransferase 2-like 2; EC 4.2.3.134 from Homo sapiens | 28% id, 74% cov |
Pf1N1B4_3506: Cysteine synthase B (EC 2.5.1.47) is similar to: | PaperBLAST |
THRC_MYCTU / P9WG59: Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis | 33% id, 33% cov |
Pf1N1B4_2796: Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) is similar to: | PaperBLAST |
OBLA_EMEVA / A0A1V1FVQ6: Ophiobolin F synthase oblA; Bifunctional sesterterpene synthase oblA; Ophiobolin biosynthesis cluster protein A; EC 4.2.3.145; EC 2.5.1.29; EC 2.5.1.81 from Emericella variicolor | 23% id, 40% cov |
OBLA_COCH5 / M2V8C1: Ophiobolin F synthase oblA; Bifunctional sesterterpene synthase oblA; Ophiobolin biosynthesis cluster protein A; EC 4.2.3.145; EC 2.5.1.29; EC 2.5.1.81 from Cochliobolus heterostrophus | 24% id, 37% cov |
OBLA_ASPCI / A0A0U5G0B1: Ophiobolin F synthase; OS; Aspergilol biosynthesis cluster protein AuAS; EC 4.2.3.145; EC 2.5.1.29; EC 2.5.1.81 from Aspergillus calidoustus | 23% id, 39% cov |
Pf1N1B4_2716: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) is similar to: | PaperBLAST |
AT2L2_HUMAN / Q8IUZ5: 5-phosphohydroxy-L-lysine phospho-lyase; Alanine--glyoxylate aminotransferase 2-like 2; EC 4.2.3.134 from Homo sapiens | 30% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 15 reading frames. Except for 5 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1773113-1774360 (frame -2) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
EVS_ACTMD / C6WFL3: 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Actinosynnema mirum | 36% id, 96% cov |
eevs / E7EXW6: 2-epi-5-epi-valiolone synthase (EC 4.2.3.152) from Danio rerio | 28% id, 87% cov |
114443-114904 (frame +2) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
PTPS_MOUSE / Q9R1Z7: 6-pyruvoyl tetrahydrobiopterin synthase; PTP synthase; PTPS; EC 4.2.3.12 from Mus musculus | 32% id, 97% cov |
456295-456693 (frame -3) on unitig_3|quiver|pilon is similar to: | PaperBLAST |
PTPS_DROME / P48611: 6-pyruvoyl tetrahydrobiopterin synthase; PTP synthase; PTPS; Protein purple; Sepiapterin synthase A; EC 4.2.3.12 from Drosophila melanogaster | 37% id, 76% cov |
4719304-4720299 (frame +1) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
P83823: threonine synthase (EC 4.2.3.1) from Thermus thermophilus | 28% id, 97% cov |
O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus | 29% id, 82% cov |
3911613-3912626 (frame +3) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
THRC_MYCTU / P9WG59: Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis | 31% id, 40% cov |
Lawrence Berkeley National Laboratory