Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 45 curated entries in PaperBLAST's database that match '4.4.1.13' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4890: Cystathionine gamma-lyase (EC 4.4.1.1)
is similar to:
PaperBLAST

METC_COXBU / Q83A83: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Coxiella burnetii

66% id,
97% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

54% id,
98% cov

B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

52% id,
95% cov

More...

Pf1N1B4_4430: Cystathionine beta-lyase (EC 4.4.1.8)
is similar to:
PaperBLAST

METC_BORAV / Q07703: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; Osteotoxin; EC 4.4.1.13 from Bordetella avium

43% id,
99% cov

METC_ECOLI / P06721: Cystathionine beta-lyase MetC; CBL; CL; Beta-cystathionase MetC; Cysteine desulfhydrase MetC; CD; Cysteine lyase MetC; Cysteine-S-conjugate beta-lyase MetC; EC 4.4.1.13; EC 4.4.1.28 from Escherichia coli
MetC / b3008: cystathionine β-lyase / L-cysteine desulfhydrase / alanine racemase (EC 4.4.1.13; EC 4.4.1.1; EC 4.4.1.28; EC 5.1.1.1) from Escherichia coli
metC / P06721: cystathionine β-lyase / L-cysteine desulfhydrase / alanine racemase (EC 4.4.1.13; EC 4.4.1.1; EC 5.1.1.10) from Escherichia coli

41% id,
99% cov

METC_YEAST / P43623: Putative cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; Increased recombination centers protein 7; EC 4.4.1.13 from Saccharomyces cerevisiae
IRC7 / P43623: cysteine-S-conjugate β-lyase monomer (EC 4.4.1.13; EC 4.4.1.1) from Saccharomyces cerevisiae
P43623: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Saccharomyces cerevisiae

37% id,
97% cov

More...

Pf1N1B4_4946: putative aminotransferase
is similar to:
PaperBLAST

CBL_BACSU / Q08432: Cystathionine beta-lyase PatB; CBL; Beta-cystathionase PatB; Cysteine lyase PatB; Cysteine-S-conjugate beta-lyase PatB; EC 4.4.1.13 from Bacillus subtilis

38% id,
100% cov

MALY_ECOLI / P23256: Protein MalY; EC 4.4.1.13 from Escherichia coli
MalY / b1622: negative regulator of MalT activity/cystathionine β-lyase (EC 4.4.1.13; EC 4.4.1.1; EC 4.4.1.28; EC 5.1.1.1) from Escherichia coli
malY / P23256: negative regulator of MalT activity/cystathionine β-lyase (EC 4.4.1.13; EC 4.4.1.1; EC 5.1.1.10) from Escherichia coli

35% id,
99% cov

CBL_THET8 / Q5SHW0: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Thermus thermophilus

35% id,
98% cov

More...

Pf1N1B4_4889: Cystathionine beta-synthase (EC 4.2.1.22)
is similar to:
PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

37% id,
98% cov

Pf1N1B4_849: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

33% id,
96% cov

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

33% id,
96% cov

CCBL2 / Q6YP21: Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7; EC 4.4.1.13) from Homo sapiens
Q6YP21: kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Homo sapiens

33% id,
89% cov

More...

Pf1N1B4_4996: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

30% id,
97% cov

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

33% id,
80% cov

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus
Q71RI9: glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus

32% id,
76% cov

More...

Pf1N1B4_4425: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

CBL_THET8 / Q5SHW0: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Thermus thermophilus

29% id,
95% cov

lcd / Q8L0M8: cysteine-S-conjugate β-lyase (EC 4.4.1.13) from Streptococcus anginosus

26% id,
94% cov

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus
Q71RI9: glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus

29% id,
76% cov

More...

Pf1N1B4_3374: Cysteine synthase (EC 2.5.1.47)
is similar to:
PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

42% id,
64% cov

Pf1N1B4_3506: Cysteine synthase B (EC 2.5.1.47)
is similar to:
PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

41% id,
65% cov

Pf1N1B4_2863: Valine--pyruvate aminotransferase (EC 2.6.1.66)
is similar to:
PaperBLAST

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

28% id,
93% cov

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

27% id,
94% cov

CBL_CORGT / Q93QC6: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Corynebacterium glutamicum

25% id,
94% cov

More...

Pf1N1B4_5070: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

26% id,
93% cov

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

25% id,
92% cov

CCBL2 / Q6YP21: Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7; EC 4.4.1.13) from Homo sapiens
Q6YP21: kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Homo sapiens

25% id,
86% cov

More...

Pf1N1B4_4186: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

CBL_THET8 / Q5SHW0: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Thermus thermophilus

29% id,
83% cov

Pf1N1B4_555: Uncharacterized PLP-dependent aminotransferase YfdZ
is similar to:
PaperBLAST

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

23% id,
99% cov

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus
Q71RI9: glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus

24% id,
90% cov

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

25% id,
85% cov

More...

Pf1N1B4_261: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

SUR1 / Q9SIV0: alkyl-thiohydroximate C-S lyase (EC 4.4.1.13) from Arabidopsis thaliana

28% id,
80% cov

Q84UD0: cysteine-S-conjugate beta-lyase (EC 4.4.1.13); L-cystine beta-lyase (EC 4.4.1.35) from Brassica oleracea

27% id,
74% cov

MALY_ECOLI / P23256: Protein MalY; EC 4.4.1.13 from Escherichia coli
MalY / b1622: negative regulator of MalT activity/cystathionine β-lyase (EC 4.4.1.13; EC 4.4.1.1; EC 4.4.1.28; EC 5.1.1.1) from Escherichia coli
malY / P23256: negative regulator of MalT activity/cystathionine β-lyase (EC 4.4.1.13; EC 4.4.1.1; EC 5.1.1.10) from Escherichia coli

22% id,
85% cov

More...

Pf1N1B4_2158: Predicted transcriptional regulator of pyridoxine metabolism
is similar to:
PaperBLAST

SUR1 / Q9SIV0: alkyl-thiohydroximate C-S lyase (EC 4.4.1.13) from Arabidopsis thaliana

23% id,
70% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory