Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 6 curated entries in PaperBLAST's database that match '5.1.1.5' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_2146: Alanine racemase (EC 5.1.1.1) is similar to: | PaperBLAST |
LYSR_OENOB / Q04HB7: Lysine racemase; EC 5.1.1.5 from Oenococcus oeni | 28% id, 95% cov |
LYR_PROMI / M4GGR9: Lysine racemase; EC 5.1.1.5 from Proteus mirabilis | 26% id, 84% cov |
| Pf1N1B4_2559: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) is similar to: | PaperBLAST |
C7ACH5: lysine racemase (EC 5.1.1.5) from uncultured bacterium | 44% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2900792-2901919 (frame +2) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
C7ACH5: lysine racemase (EC 5.1.1.5) from uncultured bacterium | 43% id, 52% cov |
Lawrence Berkeley National Laboratory