Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 11 curated entries in PaperBLAST's database that match '5.3.1.30'.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4276: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
is similar to:
PaperBLAST

AO353_21345: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens

91% id,
100% cov

Pf6N2E2_514: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens

90% id,
100% cov

AO356_23170: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens

89% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory